PAYMENTECH INC
S-3, 1999-02-18
BUSINESS SERVICES, NEC
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<PAGE>
 
   As filed with the Securities and Exchange Commission on February 18, 1999.
                                                      Registration No. 333-_____
================================================================================
                      SECURITIES AND EXCHANGE COMMISSION
                            WASHINGTON, D.C.  20549
                                _______________
                                   FORM S-3
                       REGISTRATION STATEMENT UNDER THE
                            SECURITIES ACT OF 1933
                                _______________
                               PAYMENTECH, INC.
            (Exact name of registrant as specified in its charter)

             Delaware                                75-2634185
  (State or other jurisdiction of     (I.R.S. employer identification number)
   incorporation or organization)

                          1601 Elm Street, 9th Floor
                              Dallas, Texas 75201
                                (214) 849-2149
  (Address, including zip code, and telephone number, including area code, of
                  registrant's principal executive officers)
                                _______________

            PHILIP E. TAKEN                             COPY TO:
     Chief Administrative Officer               CHARLES D. MAGUIRE, JR.
           Paymentech, Inc.                      Jackson Walker L.L.P.
      1601 Elm Street, 9th Floor                    901 Main Street
          Dallas, Texas 75201                         Suite 6000
                                                 Dallas, Texas  75202
(Name and address of agent for service)

            (214) 849-2149
(Telephone number, including area code,
         of agent for service)


  Approximate date of commencement of proposed sale to the public: From time to
time after the effective date of this Registration Statement.

  If the only securities being registered on this Form are being offered
pursuant to dividend or interest reinvestment plans, please check the following
box. [ ]

  If any of the securities being registered on this Form are to be offered on a
delayed or continuous basis pursuant to Rule 415 under the Securities Act of
1933, other than securities offered only in connection with dividend or interest
reinvestment plans, check the following box. [X]

  If this Form is filed to register additional securities for an offering
pursuant to Rule 462(b) under the Securities Act, please check the following box
and list the Securities Act registration statement number of the earlier
effective registration statement for the same offering. [ ]

  If this Form is a post-effective amendment filed pursuant to Rule 462(c) under
the Securities Act, check the following box and list the Securities Act
registration statement number of the earlier effective registration statement
for the same offering. [ ]

  If delivery of the prospectus is expected to be made pursuant to Rule 434,
please check the following box. [ ]

                        CALCULATION OF REGISTRATION FEE
<TABLE>
<CAPTION>
========================================================================================================== 
                                                      Proposed            Proposed
           Title of                Amount             Maximum             Maximum             Amount of
   Each Class of Securities         to be         Offering Price         Aggregate          Registration
       to be Registered          Registered       Per Share /(1)/   Offering Price /(1)/     Fee /(1)/
- ----------------------------------------------------------------------------------------------------------
<S>                             <C>               <C>               <C>                    <C>
Common Stock, $.01 par value...  344,794 shares     $18.4375            $6,357,139            $1,767.28 
========================================================================================================== 
</TABLE>

(1)  Estimated solely for the purpose of calculating the registration fee.
     Pursuant to Rule 457(c), the offering price and registration fee are based
     on a price of $18.4375 per share, which price is an average of the high and
     low prices of the Common Stock as reported on the New York Stock Exchange
     on February 11, 1999.

  The Registrant hereby amends this Registration Statement on such date or dates
as may be necessary to delay its effective date until the Registrant shall file
a further amendment which specifically states that this Registration Statement
shall thereafter become effective in accordance with Section 8(a) of the
Securities Act of 1933 or until the Registration Statement shall become
effective on such date as the Commission, acting pursuant to Section 8(a), may
determine.
<PAGE>
 
PROSPECTUS
                               PAYMENTECH, INC.

                        344,794 SHARES OF COMMON STOCK

     This Prospectus relates to the offer and sale of up to 344,794 shares (the
"Shares") of common stock, par value $0.01 per share (the "Common Stock") of
Paymentech, Inc. (the "Company").

     The Common Stock being registered is being offered for the account of
James Margolis, a stockholder of the Company (the "Selling Stockholder"). See
"Selling Stockholder." The Company will not receive any proceeds from the sale
of shares of Common Stock offered hereby. The shares may be offered in
transactions on the New York Stock Exchange (the "NYSE"), in negotiated
transactions, or through a combination of such methods of distribution, at
prices relating to the prevailing market prices or at negotiated prices. See
"Plan of Distribution."

     The Common Stock is quoted on the NYSE under the symbol "PTI." On 
February 11, 1999, the closing price of the Common Stock, as reported on the
NYSE, was $18.6875 per share.

     Upon any sale of the Common Stock offered hereby, the Selling Stockholder
and participating agents, brokers, dealers or market-makers may be deemed to be
underwriters as that term is defined in the Securities Act of 1933, as amended
(the "Securities Act"), and commissions or discounts or any profit realized on
the resale of such securities purchased by them may be deemed to be underwriting
commissions or discounts under the Securities Act.  See "Plan of Distribution."

     No underwriter is being utilized in connection with this offering.  The
Company will pay all expenses of this Offering, which are estimated to be
approximately $9,267.

  THESE SECURITIES HAVE NOT BEEN APPROVED OR DISAPPROVED BY THE SECURITIES AND
 EXCHANGE COMMISSION OR ANY STATE SECURITIES COMMISSION NOR HAS THE SECURITIES
   AND EXCHANGE COMMISSION OR ANY STATE SECURITIES COMMISSION PASSED UPON THE
ACCURACY OR ADEQUACY OF THE PROSPECTUS.  ANY REPRESENTATION TO THE CONTRARY IS A
                               CRIMINAL OFFENSE.

     THE SECURITIES OFFERED HEREBY ARE SPECULATIVE AND INVOLVE A HIGH DEGREE OF
RISK. SEE "RISK FACTORS" BEGINNING ON PAGE 4 OF THE PROSPECTUS FOR A DISCUSSION
OF CERTAIN FACTORS THAT SHOULD BE CONSIDERED IN CONNECTION WITH AN INVESTMENT IN
THE SHARES OFFERED HEREBY.

               The date of this Prospectus is February 18, 1999.

<PAGE>
 
                             AVAILABLE INFORMATION

     The Company is subject to the informational requirements of the Securities
Exchange Act of 1934, as amended (the "Exchange Act"), and in accordance
therewith, files reports, proxy statements and other information with the
Securities and Exchange Commission (the "Commission").  Such reports, proxy
statements and other information filed by the Company with the Commission can be
inspected and copied at the public reference facilities maintained by the
Commission at Judiciary Plaza, 450 Fifth Street, N.W., Room 1024, Washington,
D.C. 20549; at the Commission's Chicago Regional office located at Northwestern
Atrium Center, 500 West Madison Street, Suite 1400, Chicago, Illinois 60661-
2511; and at the Commission's New York Regional office located at 7 World Trade
Center, Room 1300, New York, New York 10048.  Copies of such material may also
be obtained at prescribed rates from the Public Reference Section of the
Commission at Judiciary Plaza, 450 Fifth Street, N.W., Room 1024, Washington,
D.C. 20549.  Additionally, the Commission maintains a website
(http://www.sec.gov) that contains reports, proxy statements and information
statements and other information regarding registrants that file electronically
with the Commission. The Company is a publicly held corporation and its Common
Stock is traded on the NYSE under the symbol "PTI."  Reports, proxy statements,
information statements and other information can also be inspected at the
offices of the NYSE, 20 Broad Street, New York, New York 10005.

     The Company intends to furnish its stockholders with annual reports
containing audited financial statements and such other periodic reports as it
may determine to furnish or as may be required by law.

     The Company has filed with the Commission in Washington, D.C., a
Registration Statement on Form S-3 (together with all exhibits thereto, the
"Registration Statement") in connection with the offer and sale of the Common
Stock offered hereby under the Securities Act.  This Prospectus does not contain
all of the information set forth or incorporated by reference in the
Registration Statement and the exhibits thereto.  For further information with
respect to the Company and the Common Stock, reference is made to the
Registration Statement and the exhibits thereto.  Copies of the Registration
Statement are available from the Commission.  Statements contained in this
Prospectus concerning the provisions of documents filed with the Registration
Statement are necessarily summaries of such documents, and each statement is
qualified in its entirety by reference to the copy of the applicable document
filed with the Commission.

     The Company's principal executive offices are located at 1601 Elm Street,
9th Floor, Dallas, Texas 75201 and its telephone number is (214) 849-2149.

                                       2
<PAGE>
 
                INCORPORATION OF CERTAIN DOCUMENTS BY REFERENCE

     The following documents, which have been filed with the Commission by the
Company, are incorporated herein by reference and made a part hereof:

     (i)   Annual Report of the Company on Form 10-K for the year ended June 30,
     1998 as amended by Form 10-K/A filed on December 16, 1998 (as amended, the
     "Annual Report");

     (ii)  All other reports filed with the Commission pursuant to Section 13(a)
     or 15(d) of the Securities Exchange Act of 1934, as amended (the "Exchange
     Act"), since the end of the fiscal year covered by the documents referred
     to in the Annual Report; and

     (iii) Description of the Common Stock contained in the Company's
     Registration Statement on Form 8-A, filed on February 23, 1996, including
     any amendment or reports filed for the purpose of updating such
     description.

     All documents filed by the Company pursuant to Sections 13(a), 13(c), 14
and 15(d) of the Exchange Act subsequent to the date of this Prospectus and
prior to the termination of the offering of the Common Stock to be made
hereunder shall be deemed to be incorporated by reference herein and to be a
part hereof from the date of filing of such documents.  Any statement contained
in a document incorporated or deemed to be incorporated by reference herein
shall be deemed to be modified or superseded for purposes of this Prospectus to
the extent that a statement contained herein or in any other subsequently filed
document which also is or is deemed to be incorporated by reference herein
modifies or supersedes such statement.  Any such statement so modified or
superseded shall not be deemed, except as so modified or superseded, to
constitute a part of this Prospectus.

     The Company will provide, without charge, to each person to whom a copy of
this Prospectus is delivered, upon the written or oral request of such person, a
copy of any or all of the documents incorporated herein by reference (other than
exhibits to such documents unless such exhibits are specifically incorporated by
reference into the information that this Prospectus incorporates).  Written or
telephone requests for such documents should be directed to Corporate Affairs
and Investor Relations Department, 1601 Elm Street, 9th Floor, Dallas, Texas
75201, telephone number (214) 849-2149.

                                       3
<PAGE>
 
                                  THE COMPANY

     Paymentech, Inc. (the "Company"), is a Delaware corporation, which engages
in the credit card industry primarily as a payment processor of credit and debit
card transactions on behalf of merchants, financial institutions and sales
agents.  According to published industry sources, the Company is the third
largest payment processor of credit and debit card transactions in the United
States.  The Company also provides third-party credit and debit authorization
services to financial institutions, sales agents and the Company's direct
merchants.  In addition, the Company markets and issues commercial cards to
business and other entities. Commercial cards facilitate centralized business-
to-business payment procedures and reporting, replacing traditional direct
payment methods.

     The Company's principal offices are located at 1601 Elm Street, 9th Floor,
Dallas, Texas 75201 (telephone number 214-849-2149).


                                  RISK FACTORS

     ANY INVESTMENT IN THE COMMON STOCK HEREBY INVOLVES A HIGH DEGREE OF RISK.
PROSPECTIVE INVESTORS SHOULD READ THIS ENTIRE PROSPECTUS CAREFULLY AND SHOULD
CONSIDER, AMONG OTHER THINGS, THE RISKS AND THE SPECULATIVE FACTORS INHERENT IN
AND AFFECTING THE COMPANY'S BUSINESS DESCRIBED BELOW AND THROUGHOUT THIS
PROSPECTUS.

COMPETITION AND INDUSTRY CONSOLIDATION

     The payment processing industry is highly competitive, especially among the
ten largest payment processors in the United States, which the Company views as
its primary competitors.  The Company also competes with other providers of
credit and debit authorization services.  The Company faces intense competition
from numerous providers of payment processing services who may employ various
competitive strategies.  Such competition requires that the Company continue to
invest resources in technological developments and restricts the prices it can
charge.

     Due to the market's requirement that payment processors provide advanced
and efficient technology, certain financial institutions and other payment
processors have recently left the business or merged with other providers,
resulting in significant consolidation in the payment processing industry.  The
Company believes the trend toward consolidation will continue as the
technological demand on processors continues to increase.  Industry
consolidation has enabled a few of the Company's competitors to have access to
significant capital, management, marketing and technological resources that are
equal to or greater than those of the Company, and there can be no assurance
that the Company will continue to be able to compete successfully with such
payment processors.

     In addition, competition in the industry has made it difficult for payment
processors to pass through increases in the interchange and assessments charged
by Visa and MasterCard, and as a result 

                                       4
<PAGE>
 
some payment processors have absorbed increased fees to maintain their merchant
bases. Although the Company's agreements with its merchants contemplate that the
Company will charge all Visa and MasterCard interchange and assessments to
merchants, there can be no assurance that competitive pressures will not require
that the Company absorb all or a portion of such fee increases in the future, or
that the Company will be able to continue to pass along fee increases to
merchants when it negotiates the renewal of such agreements. Further tightening
of margins due to fee increases or other factors may result in financial
institutions and other payment processors abandoning the payment processing
business and thus accelerating industry consolidation.

     The Company also competes against issuers of commercial cards that offer
highly competitive and attractive rates, including rates which are at or below
rates charged by the Company, in order to preserve market share.

CONTINGENT LIABILITIES THROUGH MERCHANTS

     Under the rules of Visa, MasterCard and other credit and debit card
organizations, the payment processor has certain contingent liabilities for the
transactions it processes on behalf of merchants. If a cardholder purchases a
product or service and is dissatisfied after the purchase, the cardholder may be
able to return the product and demand a refund.  If the merchant, after having
received payment from the payment processor, refuses to pay the refund or
properly provide the product or service, a chargeback results.  The obligation
to fund the chargeback is the liabilitity of the payment processor if the
merchant does not have sufficient funds to repay the chargeback.  In most cases,
this contingent liability is unlikely because the product or service is
delivered when purchased and credit is issued on returned items.  For certain
industries, such as the direct response marketing industry, where the cardholder
is not present to provide a signature, the Company's contingent liability is
greater.  The Company minimizes its exposure to such contingent liabilities by
conducting a thorough credit review of its merchants initially and on a regular
basis to monitor risks.  The Company also has the ability to hold a merchant's
daily settlement if fraudulent activity is suspected.  In addition, the Company
obtains cash deposits from certain customers as an offset to potential
contingent liabilities that are the responsibility of such customers.  These
cash deposits are primarily related to merchants in the direct response
marketing industry.  The Company's payment processing operation is not exposed
to Cardholder credit losses.

SIGNIFICANT EQUITY POSITION OF BANC ONE CORPORATION

     BANK ONE CORPORATION, f/k/a BANC ONE CORPORATION ("Bank One") is the
indirect owner (through First USA Financial, Inc., a wholly-owned subsidiary of
Bank One) of approximately 55% of the outstanding shares of Common Stock and has
substantial influence over the election of members of the Company's Board of
Directors and over the business and affairs of the Company, including any
determinations with respect to mergers or other business combinations involving
the Company, the acquisition or disposition of assets by the Company, the
incurrence of indebtedness by the Company, the issuance of any additional Common
Stock or other equity securities and the payment of any dividends with respect
to the Common Stock. In addition, Bank One has substantial influence in
approving matters submitted to a vote of the Company's stockholders and in
causing or preventing a

                                       5
<PAGE>
 
change in control of the Company. Moreover, four of the eight members of the
Company's Board of Directors are directors and/or key employees of Bank One and 
one of the members is a director and executive officer of First USA Financial, 
Inc.

CONFLICTS OF INTEREST WITH BANK ONE

     There is currently substantial overlap in the Boards of Directors of Bank
One and the Company.  Certain conflicts of interest and disagreements between
Bank One and the Company could arise in connection with the interpretation of
the various intercompany agreements entered into between First USA, as Bank
One's predecessor, and the Company in connection with the Company's March 1996
initial public offering of Common Stock.  In addition, Bank One and the Company
both own or have interests in entities in the business of payment processing and
issuing credit cards.  As a result, conflicts of interest may arise between Bank
One and the Company in connection with future payment processing and commercial
card opportunities.  Such conflicts of interest may be more difficult to resolve
than would be the case if Bank One and the Company did not have overlapping
directors and may be resolved in a manner which may appear to be more favorable
to one of the parties.

HOLDING COMPANY STRUCTURE

     As a holding company, the Company is dependent on the cash flow from its
subsidiaries, received through dividends or other intercompany transfers of
funds, to service its debt and meet its operating expenses and other
obligations.  However, First USA Financial Services, Inc. ("Financial
Services"), a wholly-owned subsidiary of the Company, may pay dividends and make
certain other intercompany transfers of funds only up to amounts permitted by
banking regulations.  Cash flow from subsidiaries is expected, for the
foreseeable future, to be a significant source of the Company's liquidity.
Limitations on the availability to the Company of cash flow from its
subsidiaries could adversely impact the Company's liquidity.

ANTITAKEOVER PROVISIONS

     The Company's Certificate of Incorporation and By-laws contain certain
provisions that may have the effect, either alone or in combination with each
other, of making more difficult or discouraging a business combination involving
the Company that is deemed undesirable by the Company's Board of Directors, or
of delaying or preventing changes in control or management of the Company.
Although such provisions may not have substantial practical significance to
investors while 

                                       6
<PAGE>
 
Bank One maintains a significant equity interest in the Company, such provisions
could become significant should Bank One reduce its ownership interest in the
Company such that Bank One no longer has a substantial influence over the
management of the Company.

REGULATION

     The effects of, and changes in, monetary and fiscal policies, laws and 
regulations (financial, regulatory or otherwise), other activities of 
governments, agencies and similar organizations, changes in taxation of the 
Company's earnings and social and economic conditions, such as inflation, may 
all have a negative effect on the Company and its business. For example, from 
time to time legislation is proposed by members of Congress which, if adopted, 
would have the effect of additional disclosure to consumers regarding interest 
rates and fees on credit card accounts by credit card issuers, and in the most 
extreme cases, limiting the interest rate that could be charged on such 
accounts.

     In addition, as a Utah-chartered industrial loan corporation, the deposits
of which are insured by the Bank Insurance Fund of the Federal Deposit Insurance
Corporation, Financial Services is subject to regulation under both state and
federal law. The restrictions imposed by such laws and regulations limit
Financial Services' discretion in operating its businesses. No assurance can be
given that such laws and regulations will not be amended or construed
differently, or that new laws and regulations will not be adopted, the effect of
which could be to adversely affect the operations of the Company.

SHARES ELIGIBLE FOR FUTURE SALE

     Sales of substantial amounts of Common Stock in the public market, or the
perception that such sales could occur, could adversely affect prevailing market
prices of the Common Stock.  The Company is unable to make any prediction as to
the effect, if any, that future sales of Common Stock or the availability of
Common Stock for sale will have on the market price of the Common Stock
prevailing from time to time.

RISKS ASSOCIATED WITH ACQUISITIONS

     The Company has relied in part on acquisitions in order to achieve greater
economies of scale and to develop new types of systems and expertise. The
success of the Company's acquisition strategy is dependent on a number of
factors, including the Company's ability to identify and consummate acquisitions
of merchant portfolios, operating businesses and payment processing assets upon
satisfactory terms and the Company's ability to achieve a smooth and timely
integration of newly acquired assets and operating businesses and to achieve
anticipated synergies. There can be no assurance that the Company will find
suitable acquisition candidates at acceptable prices or succeed in integrating
any acquired business into the Company's existing business.

DEPENDENCE ON TECHNOLOGY

     The payment processing and credit card industries are characterized by
advanced telecommunications systems and services.  Systems delays, malfunctions
and errors in the proprietary and third party systems and networks used by the
Company for its payment processing services could lead to processing delays and
additional costs to the Company.  If not corrected in a timely fashion, such
delays, malfunctions and errors could lead to customer dissatisfaction, which
could ultimately affect the Company's customer base and the level of service it
is able to provide to its customers.

NEW PRODUCTS AND SERVICES

     Difficulties or delays in the development, production, testing and 
marketing of products or services, including the Company's commercial card 
operations, and the costs and losses associated with such difficulties or 
delays, may have a negative impact on the Company's business, operations and 
financial results. These may include, without limitation, a failure to implement
new product or service programs when anticipated, the failure of customers to 
accept these products or services when planned, losses associated with the 
testing of new products or services or financial, legal or other difficulties 
that may arise in the course of such implementation.

CREDIT CARD ACCEPTANCE

     A lack of growth or a decline in the number and scope of card-based payment
transactions, on a worldwide basis, and a lack of growth or a decline in the 
types of industries and merchants that accept card-based transactions as a 
method of payment, may have a negative impact on the Company's business, 
operations and financial results.

SEASONALITY

     The Company's revenue generally reflects the seasonal fluctuations that are
typically associated with traditional peaks in consumer spending. Such peaks 
fall in different quarters for different divisions of the Company because of the
varying nature of the Company's market niches and the varying nature of consumer
trends in such markets.

                                       7
<PAGE>
 
     The payment processing and credit card industries have been characterized
by rapid technological advancements and frequent new product and service
introductions.  The ability of the Company to compete in these industries is
dependent on the Company's ability to adapt to new technologies and develop new
products and services.  There can be no assurance that the Company will not
encounter difficulties or delays in the development, production, testing and
marketing of products or services, including the Company's new commercial card
operations, or that such difficulties or delays will not result in increased
costs and losses.

LITIGATION

     The Company is a defendant in a putative class action suit commenced in
October 1997 against the Company, and a current and a former officer of the
Company alleging, among other things, that the defendants violated United States
securities laws by publicly issuing false and misleading statements and omitting
to disclose material adverse information regarding the Company' business. The
Company has notified its insurance carriers of this action. It is premature to
determine whether the Company will have any liability in the action or whether,
if so, that liability will be material.

YEAR 2000

     As a result of computer programs written using two digits rather than four 
to define the applicable year, certain of the Company's computer systems may 
require modifications in order to properly function beginning with the year 
2000. While the Company has developed a plan to ensure that its computer systems
will function properly with respect to dates in the year 2000 and thereafter, 
the failure to make timely remediation of such systems could have a material 
adverse effect on the Company's business, operations and financial results. In 
addition, the Company maintains interface systems with third-party vendors and 
large customers, and the Company could be adversely affected to the extent that 
third parties with which it interfaces have not adequately addressed their own 
year 2000 issues. A description of the Company's year 2000 remediation and 
contingency plans is included in the Annual Report and incorporated herein by 
reference.


                                       8
<PAGE>
 
                                USE OF PROCEEDS

     The Company will not receive any proceeds from the sale of the Common Stock
hereby.


                              SELLING STOCKHOLDER

     The table below sets forth information with respect to the beneficial
ownership of the Company's Common Stock by the Selling Stockholder immediately
prior to this offering and as adjusted to reflect the sale of shares of Common
Stock pursuant to the offering:

<TABLE>
<CAPTION>
                                      OWNERSHIP OF         COMMON STOCK          AMOUNT AND
                                      COMMON STOCK PRIOR   OFFERED FOR SELLING   PERCENTAGE OF CLASS
NAME                                  TO OFFERING          SHAREHOLDERS          AFTER OFFERING/(1)/
- ----                                  -----------          ------------          -------------------

<S>                                   <C>                  <C>                   <C>
James Margolis                              584,481             344,794          **

</TABLE>
____________________
 
**    Indicates shares held are less than 1% of class.

(1)  Based on 36,360,377 shares of Common Stock outstanding on January 30,
     1999.


                             PLAN OF DISTRIBUTION

     The Shares may be sold from time to time by any of the Selling
Stockholder, or permitted transferees.  The Shares may be disposed of from time
to time in one or more transactions through any one or more of the following:
(i) to purchasers directly, (ii) in ordinary brokerage transactions and
transactions in which the broker solicits purchasers, (iii) through underwriters
or dealers who may receive compensation in the form of underwriting discounts,
concessions or commissions from the Selling Stockholder or such permitted
transferees/or from the purchasers of the Shares for whom they may act as agent,
(iv) the writing of options on the Shares, (v) the pledge of the Shares as
security for any loan or obligation, including pledges to brokers or dealers who
may, from time to time, themselves effect distributions of the Shares or
interests therein, (vi) purchases by a broker or dealer as principal and resale
by such broker or dealer for its own account pursuant to this Prospectus, (vii)
a block trade in which the broker or dealer so engaged will attempt to sell the
Shares as agent but may position and resell a portion of the block as principal
to facilitate the transaction and (viii) an exchange distribution in accordance
with the rules of such exchange, including the NYSE.  Such sales may be made at
prices and at terms then prevailing or at prices related to the then current
market price or at negotiated prices and terms.  In effecting sales, brokers or
dealers may arrange for other brokers or dealers to participate. The Selling
Stockholder or such successors in interest, and any underwriters, brokers,
dealers or agents that participate in the distribution of the Shares, may be
deemed to be "underwriters" within the meaning of the Securities Act, and any
profit on the sale of the Shares by them and any discounts, 

                                       9
<PAGE>
 
commissions or concessions received by any such underwriters, brokers, dealers
or agents may be deemed to be underwriting commissions or discounts under the
Securities Act.

     The Selling Stockholder will pay all underwriting discounts or commissions,
brokers' fees and the fees and expenses of any counsel to the Selling
Stockholder related thereto. The Company will pay the remaining expenses of the
Offering.

     In the event of a material change in the plan of distribution disclosed in
this Prospectus, the Selling Stockholder will not be able to effect transactions
in the Shares pursuant to this Prospectus until such time as a post-effective
amendment to the Registration Statement is filed with, and declared effective
by, the Commission.


                                 LEGAL MATTERS

     Certain legal matters in connection with the Common Stock offered hereby
have been passed upon for the Company by John C. Kight, legal counsel for the
Company. Mr. Kight, owns, and has options to acquire, an aggregate of less than
0.1% of the outstanding shares of Common Stock of the Company.


                                    EXPERTS

     The consolidated financial statements of Paymentech, Inc. incorporated by
reference in Paymentech, Inc.'s Annual Report (on Form 10-K as amended by Form
10-K/A) for the year ended June 30, 1998, have been audited by Ernst & Young
LLP, independent auditors, as set forth in their report thereon incorporated by
reference therein and incorporated herein by reference. Such consolidated
financial statements are incorporated herein by reference in reliance upon such
report given upon the authority of such firm as experts in accounting and
auditing.
 

                                INDEMNIFICATION

     As authorized by Section 145 of the Delaware General Corporate Law, each
director and officer of the Company may be indemnified by the Company against
expenses (including attorney's fees, judgments, fines and amounts paid in
settlement) actually and reasonably incurred in connection with the defense or
settlement of any threatened, pending or completed legal proceedings in which he
is involved by reason of the fact he is or was a director or officer of the
Company if he acted in good faith and in a manner that he reasonably believed to
be in or not opposed to the best interests of the Company, and, with respect to
any criminal action or proceeding, if he had no reasonable cause to believe that
his conduct was unlawful.  If the legal proceeding, however, is by or in the
right of the Company, the director or officer may not be indemnified in respect
of any claim, issue or matter as to which he shall have been adjudged to be
liable for negligence or misconduct in the performance of his duty to the
Company unless a court determines otherwise.

                                       10
<PAGE>
 
     In addition, the Company has directors' and officers' liability coverage
pursuant to a policy maintained by Paymentech, Inc.

     Article Eighth of the Certificate of Incorporation of the Company provides
that, to the fullest extent permitted by law, directors of the Company will not
be liable for monetary damages to the Company or its stockholders for breaches
of their fiduciary duties.

     Insofar as indemnification for liabilities arising under the Securities Act
may be permitted to directors, officers or persons controlling the Company
pursuant to the foregoing provisions, the Company has been informed that in the
opinion of the Commission, such indemnification is against public policy as
expressed in the Securities Act and is therefore unenforceable.

 

                                       11
<PAGE>
 
No person has been authorized to                    344,794 SHARES     
give any information or to make any                                
representations other than those                    
contained in this Prospectus, and                                  
if given or made, such information                    COMMON STOCK
or representations must not be                                     
relied upon. This Prospectus does                   
not constitute an offer to sell or                  
a solicitation to buy any securities                
other than registered securities to                 
which it relates, or an offer to or                 
a solicitation of any person in any 
jurisdiction where such offer or
solicitation would be unlawful.  
The delivery of this Prospectus at 
any time does not imply that the                     PAYMENTECH, INC.
information herein is correct as of                                  
any time subsequent to its date.                                     
                                                                     
       TABLE OF CONTENTS                             
       -----------------
 
                              Page
                              ----
 
Available Information .........  2
Incorporation by Reference ....  3
The Company ...................  4
Risk Factors ..................  4
Use of Proceeds ...............  9
SELLING STOCKHOLDER ...........  9
PLAN OF DISTRIBUTION ..........  9
LEGAL MATTERS ................. 10
EXPERTS ....................... 10
INDEMNIFICATION ............... 10                    FEBRUARY 18, 1999
 

=====================================

                                
<PAGE>
 
                                    PART II
                    INFORMATION NOT REQUIRED IN PROSPECTUS

ITEM 14.  OTHER EXPENSES OF ISSUANCE AND DISTRIBUTION.

     The estimated expenses to be incurred in connection with the issuance and
distribution of the Common Stock covered by this Registration Statement will be
paid by the Company, are as follows:
 
          Registration Fee..................   $1,767
          Printer Expenses..................    1,000
          Accounting Fees and Expenses......    3,000
          Legal Fees and Expenses...........    3,000
          Miscellaneous.....................      500
 
          Total.............................   $9,267 


ITEM 15.  INDEMNIFICATION OF DIRECTORS AND OFFICERS.

     As authorized by Section 145 of the Delaware General Corporate Law, each
director and officer of the Company may be indemnified by the Company against
expenses (including attorneys' fees, judgments, fines and amounts paid in
settlement) actually and reasonably incurred in connection with the defense or
settlement of any threatened, pending or completed legal proceedings in which he
is involved by reason of the fact he is or was a director or officer of the
Company if he acted in good faith and in a manner that he reasonably believed to
be in or not opposed to the best interests of the Company, and, with respect to
any criminal action or proceeding, if he had no reasonable cause to believe that
his conduct was unlawful.  If the legal proceeding, however, is by or in the
right of the Company, the director or officer may not be indemnified in respect
of any claim, issue or matter as to which he shall have been adjudged to be
liable for negligence or misconduct in the performance of his duty to the
Company unless a court determines otherwise.

     In addition, the Company has directors' and officers' liability coverage
pursuant to a policy maintained by Paymentech, Inc.

     Article Eighth of the Certificate of Incorporation of the Company provides
that, to the fullest extent permitted by law, directors of the Company will not
be liable for monetary damages to the Company or its stockholders for breaches
of their fiduciary duties.

Item 16.  Exhibits.

     The following is a list of all exhibits filed as a part of this
Registration Statement on Form S-3, including those incorporated herein by
reference.

Exhibit
Number    Description of Exhibit
- -------   ----------------------

1              None.
2              None.
4              Description of the Common Stock contained in the Company's
               Registration Statement on Form 8-A filed on February 23, 1996,
               incorporated herein by reference.
5              Opinion of John C. Kight.*
8              None.
12             None.
15             None.

                                      II-1
<PAGE>
 
23(a)          Consent of Ernst & Young, LLP*
23(b)          Consent of John C. Kight (included in his opinion filed as
               Exhibit 5 to this Registration Statement).*
24             Power of Attorney (appearing on page II-4 of this Registration
               Statement).*
25             None.
26             None.
27             None.
- ------------

*    Filed herewith.


ITEM 17.  UNDERTAKINGS.

     (a)  The undersigned registrant hereby undertakes:

               (1)  To file, during any period in which offers or sales are
          being made, a post-effective amendment to this Registration Statement:

                    (i)    To include any prospectus required by section
          10(a)(3) of the Securities Act;

                    (ii)   To reflect in the prospectus any facts or events
          arising after the effective date of the Registration Statement (or the
          most recent post-effective amendment thereof) which, individually or
          in the aggregate, represent a fundamental change in the information
          set forth in the Registration Statement. Notwithstanding the
          foregoing, any increase or decrease in volume of securities offered
          (if the total dollar value of securities offered would not exceed that
          which was registered) and any deviation from the low or high end of
          the estimated maximum offering range may be reflected in the form of a
          prospectus filed with the Commission pursuant to Rule 424(b) ((S)
          230.424(b)) if, in the aggregate, the changes in volume and price
          represent no more than a 20% change in the maximum aggregate offering
          price set forth in the "Calculation of Registration Fee" table in the
          effective registration statement.;

                    (iii)  To include any material information with respect to
          the plan of distribution not previously disclosed in the Registration
          Statement or any material change to such information in the
          Registration Statement;

     Provided, however, that paragraphs (a)(1)(i) and (a)(1)(ii) do not apply if
the information required to be included in a post-effective amendment by those
paragraphs is contained in periodic reports filed by the registrant pursuant to
Section 13 or Section 15(d) of the Exchange Act that are incorporated by
reference in the Registration Statement.

          (2)  That, for the purpose of determining any liability under the
Securities Act, each such post-effective amendment shall be deemed to be a new
registration statement relating to the securities offered therein, and the
offering of such securities at that time shall be deemed to be the initial bona
fide offering thereof.

          (3)  To remove from registration by means of a post-effective
amendment any of the securities being registered which remain unsold at the
termination of the offering.

          (b)  The undersigned registrant hereby undertakes that, for purposes
of determining any liability under the Securities Act, each filing of the
registrant's annual report pursuant to Section 13(a) or Section 15(d) of the
Exchange Act that is incorporated by reference in the Registration Statement
shall be deemed to be a new registration statement relating to the securities
offered therein, and the offering of such securities at that time shall be
deemed to be the initial bona fide offering thereof.

                                      II-2
<PAGE>
 
          (c)  Insofar as indemnification for liabilities arising under the
Securities Act may be permitted to directors, officers and controlling persons
of the registrant pursuant to the foregoing provisions, or otherwise, the
registrant has been advised that in the opinion of the Commission such
indemnification is against public policy as expressed in the Securities Act and
is, therefore, unenforceable. In the event that a claim for indemnification
against such liabilities (other than the payment by the registrant of expenses
incurred or paid by a director, officer or controlling person of the registrant
in the successful defense of any action, suit or proceeding) is asserted by such
director, officer or controlling person in connection with the securities being
registered, the registrant will, unless in the opinion of its counsel the matter
has been settled by controlling precedent, submit to a court of appropriate
jurisdiction the question whether such indemnification by it is against public
policy as expressed in the Securities Act and will be governed by the final
adjudication of such issue.

                                      II-3
<PAGE>
 
                                  SIGNATURES

     Pursuant to the requirements of the Securities Act of 1933, the Registrant
has duly caused this Registration Statement to be singed on its behalf by the
undersigned, thereunto duly authorized, the the City of Dallas, State of Texas,
on February 18, 1999.

                             PAYMENTECH, INC.

                             By:   /S/ Pamela H. Patsley
                                ------------------------------------------------
                                    President
                                    and Chief Executive Officer

     Pursuant to the requirements of the Securities Act of 1933, this
Registration Statement has been signed by the following persons in the
capacities indicated on February 18, 1999.


                               POWER OF ATTORNEY

     We, the undersigned directors and officers of Paymentech, Inc. and each of
us, do hereby constitute and appoint Pamela H. Patsley and Roger C. Hart, our
true and lawful attorneys and agents, with power of substitution, to do any and
all acts and things in our name and behalf in our capacities as directors and
officers and to execute any and all instruments for us and in our names in the
capacities indicated above, which said attorneys and agents may deem necessary
or advisable to enable said corporation to comply with the Securities Act of
1933, as amended, and any rules, regulations and requirements of the Securities
and Exchange Commission, in connection with this Registration Statement,
including specifically, but without limitation, power and authority to sign for
us or any of us in our names in the capacities indicated below, and any and all
amendments (including post-effective amendments) hereto and we do hereby ratify
and confirm all that the said attorneys and agents, or their substitute or
substitutes shall do or cause to be done by virtue hereof.


                                  SIGNATURES

             SIGNATURE                                    TITLE
             ---------                                    -----

     /S/ Richard W. Vague              Chairman of the Board
- ----------------------------------
         Richard W. Vague   

     /S/ Pamela H. Patsley             President, Chief Executive Officer and 
- ----------------------------------     Director (Principal Executive Officer)
         Pamela H. Patsley             

     /S/ Kathryn J. Kessler            Chief Financial Officer
- ----------------------------------     (Principal Financial Officer)
         Kathryn J. Kessler           

     /S/ Gene H. Bishop                Director
- ----------------------------------
         Gene H. Bishop

     /S/ William P. Boardman           Director
- ----------------------------------
         William P. Boardman

     /S/ John B. McCoy                 Director
- ----------------------------------
         John B. McCoy

     /S/ Rupinder S. Sidhu             Director
- ----------------------------------
         Rupinder S. Sidhu

     /S/ Ronald G. Steinhart           Director
- ----------------------------------
         Ronald G. Steinhart


     /S/ John C. Tolleson              Director
- ----------------------------------
         John C. Tolleson 

                                      II-4
<PAGE>
 
                               INDEX TO EXHIBITS
                               -----------------
Exhibit No.    Exhibit
- -----------    -------

1              None.

2              None.

4              Description of the Common Stock contained in the Company's
               Registration Statement on Form 8-A filed on February 23, 1996,
               incorporated herein by reference.

5              Opinion of John C. Kight.*

8              None.

12             None.

15             None.

23(a)          Consent of Ernst & Young, LLP*

23(b)          Consent of John C. Kight (included in his opinion filed as
               Exhibit 5 to this Registration Statement).*

24             Power of Attorney (appearing on page II-4 of this Registration
               Statement).*

25             None.

26             None.

27             None.

- ------------

*              Filed herewith.

                                      II-5

<PAGE>
 
                                                                       EXHIBIT 5

                           OPINION OF JOHN C. KIGHT

                            [PAYMENTECH LETTERHEAD]

                               February 18, 1999



Paymentech, Inc.
1601 Elm Street, 9/th/ Floor
Dallas, Texas 75201

Ladies and Gentlemen:

     I am legal counsel for Paymentech, Inc., a Delaware corporation (the
"Company"), and have acted as such in connection with the registration under the
Securities Act of 1933, as amended (the "Act"), of 344,794 shares of the
Company's common stock, par value $.01 per share (the "Common Stock") held by
James Margolis as described in the Registration Statement of the Company on Form
S-3 (the "Registration Statement") to be filed with the Securities and Exchange
Commission on or about the date hereof.

     In connection with this opinion, I have examined and am familiar with
originals or copies, certified or otherwise identified to my satisfaction, of
(i) the Registration Statement, (ii) the Certificate of Incorporation and By-
laws of the Company, each as amended to the date hereof, and (iii) a specimen
certificate for the Common Stock.  I have also examined originals or copies,
certified or otherwise identified to my satisfaction, of such records of the
Company and such agreements, certificates of public officials, certificates of
officers or other representatives of the Company and others, and such other
documents, certificates and records, as I have deemed necessary or appropriate
as a basis for the opinions set forth herein.

     In my examination, I have assumed the legal capacity of all persons who
executed documents reviewed by me, the genuineness of all signatures on
documents reviewed by me, the authenticity of all documents submitted to me as
originals, the conformity to original documents of all documents submitted to me
as certified or photostatic copies and the authenticity of the originals of such
latter documents.  I have also assumed that the certificates representing such
shares of Common Stock will be signed by facsimile or otherwise by authorized
officers of the Company and of the transfer agent for the Common Stock and
registered by the registrar for the Common Stock and conform and will conform to
the specimen thereof examined by me.  As to any facts material to the opinions
expressed herein which were not independently established or verified, I have
relied upon oral or written statements and representations of officers and other
representatives of the Company and others.

     Based upon and subject to the foregoing, I am of the opinion that such
shares of Common Stock have been duly authorized and, when issued and delivered,
against receipt by the Company of the agreed consideration therefor, will be
validly issued, fully paid and nonassessable.


                                       1
<PAGE>
 
     I hereby consent to the filing of this opinion with the Securities and
Exchange Commission as Exhibit 5 to the Registration Statement.


                                        Very truly yours,



                                        /s/ John C. Kight
                                        -------------------------------------
                                        John C. Kight
                                        Director and Counsel



                                       2

<PAGE>
 
                                                                   EXHIBIT 23(a)

                        CONSENT OF INDEPENDENT AUDITORS

We consent to the reference to our firm under the caption "Experts" in the
Registration Statement (Form S-3, to be filed on or about February 17, 1999) and
related Prospectus of Paymentech, Inc. for the registration of 344,794 shares of
its common stock and to the incorporation by reference therein of our report
dated July 23, 1998, with respect to the consolidated financial statements 
incorporated by reference in its Annual Report (Form 10-K, as amended by 
Form 10-K/A) for the year ended June 30, 1998, filed with the Securities and
Exchange Commission.

Our audits also included the financial statement schedule of Paymentech, Inc.
listed in Item 14(a) of the Form 10-K/A. This schedule is the responsibility of
the Company's management. Our responsibility is to express an opinion based on
our audits. In our opinion, the financial statement schedule referred to above,
when considered in relation to the basic financial statements taken as a whole,
presents fairly in all material respects the information set forth therein.


                                        /s/ ERNST & YOUNG LLP
                                            

Dallas, Texas
February 17, 1999


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