SIEBEL SYSTEMS INC
POS AM, 1999-03-22
PREPACKAGED SOFTWARE
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<PAGE>
 
    As filed with the Securities and Exchange Commission on March 22, 1999
                          Registration No. 333-36967
================================================================================


                      SECURITIES AND EXCHANGE COMMISSION
                            Washington, D.C. 20549
                             _____________________
                        Post-Effective Amendment No. 1
                                      To
                                   FORM S-3
                            REGISTRATION STATEMENT
                                     UNDER
                          THE SECURITIES ACT OF 1933
                             _____________________
                             SIEBEL SYSTEMS, INC.
            (Exact name of registrant as specified in its charter)

<TABLE> 
<CAPTION> 
<S>                         <C>                            <C> 
       DELAWARE                        7372                             94-3187233
(State of Incorporation)   (Primary Standard Industrial    (I.R.S.Employer Identification No.)
                           Classification Code Number)
</TABLE> 

                             _____________________
                            1855 South Grant Street
                         SAN MATEO, CALIFORNIA  94402
                                (650) 295-5000
  (Address, including zip code, and telephone number, including area code of
                   Registrant's principal executive offices)
                             _____________________
                               THOMAS M. SIEBEL
                     Chairman and Chief Executive Officer
                            1855 SOUTH GRANT STREET
                         SAN MATEO, CALIFORNIA  94402
                                (650) 295-5000
(Name, address, including zip code, and telephone number, including area code,
                             of agent for service)

                             _____________________
                                  Copies to:
                             ERIC C. JENSEN, ESQ.
                              Cooley Godward LLP
                  FIVE PALO ALTO SQUARE, 3000 EL CAMINO REAL
                           PALO ALTO, CA  94306-2155
                                (650) 843-5000
                             _____________________
<PAGE>
 
                      TERMINATION OF OFFERING AND REMOVAL
                        OF SECURITIES FROM REGISTRATION

     Pursuant to an undertaking made in Item 17 of the Registration Statement as
filed with the Commission on October 16, 1997 (Registration No. 333-36967), the
Registrant hereby removes from registration 499,132 shares of Common Stock of
the Registrant.

                                       2
<PAGE>
 
     Pursuant to the requirements of the Securities Act, this Post-Effective
Amendment No. 1 to the Registration Statement has been signed below by the
following persons in the capabilities and on the date indicated.

<TABLE> 
<CAPTION> 
            SIGNATURE                                  Title                             Date
<S>                                      <C>                                         <C> 
/s/ Howard H. Graham            *        Chairman of the Board of Directors          March 22, 1999
- ---------------------------------        and Chief Executive Officer
      Thomas M. Siebel                   (Principal Executive Officer)
                                  
                                  
/s/ Howard H. Graham                     Senior Vice President, Finance and          March 22, 1999
- ---------------------------------        Administration and Chief Financial
      Howard H. Graham                   Officer
                                         (Principal Financial and Accounting
                                         Officer)
 
/s/ Howard H. Graham            *        Director                                    March 22, 1999
- ---------------------------------
      Eric E. Schmidt 
                    
 
/s/ Howard H. Graham            *        Director                                    March 22, 1999
- ---------------------------------
      James C. Gaither 
                    
 
 
/s/ Howard H. Graham            *        Director                                    March 22, 1999
- ---------------------------------
      George T. Shaheen 
                    
 
/s/ Howard H. Graham            *        Director                                    March 22, 1999
- ---------------------------------
      Charles R. Schwab 
                   
 
/s/ Howard H. Graham            *        Director                                    March 22, 1999
- ---------------------------------
      A. Michael Spence 
</TABLE>

*    Howard H. Graham as attorney-in-fact

                                      II-1
<PAGE>
 
                                  SIGNATURES

     Pursuant to the requirements of the Securities Act, the registrant
certifies that it has reasonable grounds to believe that it meets all of the
requirements for filing on Form S-3 and has duly caused this registration
statement to be signed on its behalf by the undersigned, thereunto duly
authorized, in the City of San Mateo, State of California on March 22, 1999.

                                        SIEBEL SYSTEMS, INC.



                                   By:  /s/ Howard H. Graham
                                        --------------------
                                        Howard H. Graham
                                        Senior Vice President,
                                        Finance and Administration
                                        and Chief Financial Officer
                                        

                                      II-2


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