MICROCIDE PHARMACEUTICALS INC
10-Q, 1999-08-16
PHARMACEUTICAL PREPARATIONS
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                                  UNITED STATES
                       SECURITIES AND EXCHANGE COMMISSION

                             Washington, D.C. 20549


                                    FORM 10-Q


(X)  QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE
     ACT OF 1934 FOR THE QUARTERLY PERIOD ENDED JUNE 30, 1999

                                       OR

( )  TRANSITION  REPORT  PURSUANT  TO  SECTION  13 OR  15(d)  OF THE  SECURITIES
     EXCHANGE ACT OF 1934


                         Commission file number: 0-28006


                         MICROCIDE PHARMACEUTICALS, INC.
             (Exact name of registrant as specified in its charter)


           Delaware                                            94-3186021
(State or other jurisdiction of                           (I.R.S. Employer
 incorporation of organization)                         Identification Number)

850 Maude Avenue, Mountain View, California                     94043
 (Address of principal executive offices)                     (ZIP Code)

Registrant's telephone number, including area code:           650-428-1550


Indicate by check mark whether the registrant (1) has filed all reports required
to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during
the  preceding 12 months (or for such  shorter  period that the  registrant  was
required  to file  such  reports),  and  (2) has  been  subject  to such  filing
requirements for the past 90 days.

                               Yes _X_      No __

Number of shares of Common Stock, no par value, outstanding as of July 30, 1999:
11,105,583.


<PAGE>


                         MICROCIDE PHARMACEUTICALS, INC.

                               INDEX FOR FORM 10-Q

                                  JUNE 30, 1999


                                                                           PAGE
                                                                          NUMBER

PART I   FINANCIAL INFORMATION

Item 1.  Financial Statements and Notes

         Condensed Balance Sheets as of June 30, 1999
         and December 31, 1998                                                3

         Condensed Statements of Operations for the three and six
         months ended June 30, 1999 and June 30, 1998                         4

         Condensed Statements of Cash Flows for the six months
         ended June 30, 1999 and June 30, 1998                                5

         Notes to Condensed Financial Statements                              6

Item 2.  Management's Discussion and Analysis of Financial
         Condition and Results of Operations                                  7

Item 3.  Quantitative and Qualitative Disclosures about Market Risk          10

PART II  OTHER INFORMATION                                                   11

Item 1.  Legal Proceedings

Item 2.  Changes in Securities

Item 3.  Defaults in Senior Securities

Item 4.  Submission of Matters to a Vote of Security Holders

Item 5.  Other Information

Item 6.  Exhibits and Reports on Form 8-K


SIGNATURES                                                                   13

                                      -2-

<PAGE>


<TABLE>
                                                   MICROCIDE PHARMACEUTICALS, INC.

                                                      CONDENSED BALANCE SHEETS
                                                           (in thousands)

<CAPTION>
                                                                                                   June 30,             December 31,
                                                                                                     1999                  1998
                                                                                                   --------              --------
                                                                                                  (Unaudited)             (Note)
<S>                                                                                                <C>                   <C>
ASSETS

Current assets:
    Cash and cash equivalents                                                                      $  9,743              $  7,794
    Short-term investments                                                                           15,661                25,398
    Receivables, prepaid expenses and other current assets                                            2,421                   590
                                                                                                   --------              --------
Total current assets                                                                                 27,825                33,782

Property and equipment, net                                                                           8,762                 9,755

Other assets                                                                                            911                   953
                                                                                                   --------              --------
Total assets                                                                                       $ 37,498              $ 44,490
                                                                                                   ========              ========

LIABILITIES AND STOCKHOLDERS' EQUITY

Current liabilities:
    Accounts payable                                                                               $    160              $    642
    Accrued compensation                                                                                717                   920
    Current portion of notes payable                                                                  1,261                 1,129
    Deferred revenue                                                                                    337                   300
    Other accrued liabilities                                                                           654                   522
                                                                                                   --------              --------
Total current liabilities                                                                             3,129                 3,513

Long-term portion of notes payable                                                                    2,267                 2,912
Accrued rent                                                                                            229                   127

Stockholders' equity:
    Common stock                                                                                     66,993                66,902
    Deferred compensation                                                                              (212)                 (464)
    Accumulated deficit                                                                             (34,863)              (28,497)
    Accumulated other comprehensive loss                                                                (45)                   (3)
                                                                                                   --------              --------

Total stockholders' equity                                                                           31,873                37,938
                                                                                                   --------              --------

Total liabilities and stockholders' equity                                                         $ 37,498              $ 44,490
                                                                                                   ========              ========

<FN>
NOTE:  The balance  sheet at December  31, 1998 has been  derived from the audited  financial  statements  at that date but does not
include all of the information and footnotes required by generally accepted accounting principles for complete financial statements.

                                            See Notes to Condensed Financial Statements.
</FN>
</TABLE>

                                                                -3-

<PAGE>


<TABLE>
                                                   MICROCIDE PHARMACEUTICALS, INC.

                                                 CONDENSED STATEMENTS OF OPERATIONS
                                              (in thousands, except per share amounts)
                                                             (unaudited)

<CAPTION>
                                                                      Three Months Ended                      Six Months Ended
                                                                           June 30,                              June 30,
                                                                  ---------------------------           ---------------------------
                                                                    1999               1998               1999               1998
                                                                  --------           --------           --------           --------
<S>                                                               <C>                <C>                <C>                <C>
Revenues:
License, milestone and other revenues                             $   --             $   --             $    299           $   --
Research revenue                                                     1,545              2,800              3,938              5,835
                                                                  --------           --------           --------           --------
      Total revenues                                                 1,545              2,800              4,237              5,835

Operating expenses:
   Research and development                                          4,457              4,815              9,205              9,876
   General and administrative                                          979                953              1,984              2,011
                                                                  --------           --------           --------           --------
       Total operating expenses                                      5,436              5,768             11,189             11,887
                                                                  --------           --------           --------           --------

Loss from operations                                                (3,891)            (2,968)            (6,952)            (6,052)

Interest income                                                        365                504                775              1,030
Interest expense                                                      (117)               (12)              (188)               (30)
                                                                  --------           --------           --------           --------
      Net loss                                                    $ (3,643)          $ (2,476)          $ (6,365)          $ (5,052)
                                                                  ========           ========           ========           ========

Net loss per share                                                $  (0.33)          $  (0.23)          $  (0.58)          $  (0.46)
                                                                  ========           ========           ========           ========

Shares used in calculation of
 net loss per share                                                 11,078             10,957             11,052             10,941

<FN>
                                            See Notes to Condensed Financial Statements.
</FN>
</TABLE>

                                                                -4-

<PAGE>


<TABLE>
                                                   MICROCIDE PHARMACEUTICALS, INC.

                                                 CONDENSED STATEMENTS OF CASH FLOWS
                                          Increase (decrease) in cash and cash equivalents
                                                             (unaudited)

<CAPTION>
                                                                                                           Six Months Ended
                                                                                                                June 30,
                                                                                                     ------------------------------
                                                                                                       1999                  1998
                                                                                                     --------              --------
<S>                                                                                                  <C>                   <C>
Cash flows used in operating activities:
Net loss                                                                                             $ (6,365)             $ (5,052)
Adjustments to reconcile net loss to net cash
    provided by (used in) operating activities:
       Depreciation and amortization                                                                    1,396                 1,466
       Amortization of deferred compensation                                                              251                   264
       Accrued rent                                                                                       102                   (62)
       Net unrealized loss on securities                                                                  (42)                  (14)
Changes in assets and liabilities:
    Receivables, prepaid expenses and other current assets                                             (1,831)                 (641)
    Other assets                                                                                           42                  (314)
    Accounts payable                                                                                     (482)                 (326)
    Accrued compensation and other accrued liabilities                                                    (71)                   76
    Deferred revenue                                                                                       37                    89
                                                                                                     --------              --------
Net cash used in operating activities                                                                  (6,963)               (4,514)
                                                                                                     --------              --------

Cash flows used in investing activities:


Purchase of short-term investments                                                                    (16,170)              (26,410)
Maturities of short-term investments                                                                   25,907                24,010
Capital expenditures                                                                                     (403)               (1,708)
                                                                                                     --------              --------
Net cash provided by (used in) investing activities                                                     9,334                (4,108)
                                                                                                     --------              --------


Cash flows from financing activities:
Principal payments on notes payable                                                                      (513)                 (377)
Net proceeds from issuance of common stock                                                                 91                   126
                                                                                                     --------              --------
Net cash used in financing activities                                                                    (422)                 (251)
                                                                                                     --------              --------

Net decrease in cash and cash equivalents                                                               1,949                (8,873)
Cash and cash equivalents, beginning of period                                                          7,794                11,763
                                                                                                     --------              --------
Cash and cash equivalents, end of period                                                             $  9,743              $  2,890
                                                                                                     ========              ========

Supplemental disclosure of cash flow information:
Income taxes paid                                                                                    $      1              $      2
                                                                                                     ========              ========
Interest paid                                                                                        $    189              $     30
                                                                                                     ========              ========

<FN>
                                            See Notes to Condensed Financial Statements.
</FN>
</TABLE>

                                                                -5-

<PAGE>


                         MICROCIDE PHARMACEUTICALS, INC.

                     NOTES TO CONDENSED FINANCIAL STATEMENTS

                                  June 30, 1999
                                   (Unaudited)

1. Summary of Significant Accounting Policies

     Organization and Basis of Presentation

         Microcide Pharmaceuticals,  Inc. (the "Company") is a biopharmaceutical
company  whose  mission  is  to  discover,   develop  and  commercialize   novel
antimicrobials for the improved treatment of serious bacterial, fungal and viral
infections. The Company's discovery and development programs address the growing
problem of bacterial drug  resistance  and the need for improved  antifungal and
antiviral agents through two principal themes: (i) Targeted  Antibiotics,  which
focuses on developing novel antibiotics and antibiotic  potentiators to directly
address existing  bacterial and fungal  resistance  problems,  and (ii) Targeted
Genomics,  which utilizes  bacterial,  fungal and viral genetics to discover new
classes of antimicrobials and other novel treatments for infectious diseases.

         The accompanying  unaudited  condensed  financial  statements have been
prepared in accordance with generally accepted accounting principles for interim
financial  information and with the  instructions to Form 10-Q and Rule 10-01 of
Regulation  S-X.  Accordingly,  they do not include all of the  information  and
footnotes  required by generally  accepted  accounting  principles  for complete
financial statements. In the opinion of management,  all adjustments (consisting
of normal recurring accruals)  considered necessary for a fair presentation have
been included.  The results of operations  for the interim  periods shown herein
are not necessarily indicative of operating results for the entire year.

         This unaudited  financial  data should be read in conjunction  with the
financial  statements and footnotes  contained in the Company's annual report on
Form 10-K for the year ended December 31, 1998.


2. Per Share Information

         Effective December 31, 1997, the Company adopted Statement of Financial
Accounting  Standards  No. 128  "Earnings  per  Share"  ("SFAS  128").  SFAS 128
requires  the  presentation  of basic  earnings  (loss)  per share  and  diluted
earnings  (loss) per share,  if more  dilutive,  for all periods  presented.  In
accordance  with SFAS 128,  basic net loss per share has been computed using the
weighted-average number of shares of Common Stock outstanding during the period.
Diluted net loss per share has not been presented;  given the Company's net loss
position, the result would be anti-dilutive.


3. Changes in Accounting Standards

         Effective  January 31, 1998, the Company adopted Statement of Financial
Accounting Standards No. 130 "Reporting Comprehensive Income" ("SFAS 130"). SFAS
130 established new rules for the reporting and display of comprehensive  income
and its components; however, the adoption of this Statement has no impact on the
Company's  net loss or  stockholders'  equity.  SFAS 130  requires,  among other
things, unrealized gains or losses on the Company's securities to be included in
comprehensive  income or loss.  During  the six months  ended June 30,  1999 and
1998, the Company's  comprehensive  loss amounted to $6,407,000 and  $5,066,000,
respectively.

                                      -6-

<PAGE>


                         MICROCIDE PHARMACEUTICALS, INC.

         Management's Discussion and Analysis of Financial Condition and
                              Results of Operations

Overview

         As  part  of  the  Company's  strategy  to  enhance  its  research  and
development  capabilities  and to  fund,  in  part,  its  capital  requirements,
Microcide   has  entered  into   collaborative   agreements   with  three  major
pharmaceutical  companies.  The  Company has  received  license  fees,  research
support  payments and milestone  payments  pursuant to these  agreements and can
potentially receive additional research support payments,  additional  milestone
payments and royalty payments. License fees are typically nonrefundable up-front
payments for licenses to develop,  manufacture and market products, if any, that
are developed as a result of the  collaboration.  Research  support payments are
typically contractually obligated payments to fund research and development over
the term of the collaboration.  Milestone payments are payments  contingent upon
the  achievement  of specified  milestones,  such as selection of candidates for
drug  development,  the commencement of clinical trials or receipt of regulatory
approvals. If drugs are successfully developed and commercialized as a result of
the  collaborative  agreements,  the Company will receive royalty payments based
upon the net sales of such drugs.  In  addition,  the Company has derived  other
revenues  principally  through the sale of molecular  diversity samples to other
pharmaceutical and biotechnology companies for use in their research programs.

         Through June 30, 1999, the Company had received in the aggregate  $43.9
million in license fees,  milestone payments and research support payments under
the  collaborative  agreements.  Assuming  none  of the  existing  collaborative
agreements is terminated prior to its scheduled expiration,  the Company will be
entitled  to receive up to an  additional  $12.5  million  of  research  support
payments. In addition, in the event that any of the collaborative  agreements is
extended  beyond its  current  term,  the  Company  will be  entitled to receive
additional research support payments.

         In the event that the  Company  achieves  the  specified  research  and
product  development  milestones,  the  Company  will  be  entitled  to  receive
milestone  payments  under its  collaborative  agreements  with the three  major
pharmaceutical companies ranging from $13.0 million to $32.5 million per product
for human use. No royalty  payments  have yet been received and the Company does
not  expect  to  receive  royalties  based  upon the net  sales  of drugs  for a
significant number of years, if ever.

         Quarterly results of operations are subject to significant fluctuations
based  on  the  timing  and  amount  of  certain   revenues   earned  under  the
collaborative  agreements.  The Company expects to incur operating losses in the
future.

         This Form 10-Q contains  forward-looking  statements based upon current
expectations,  including  statements  with  regard to the  potential  receipt of
additional research support payments,  milestone payments and royalties from the
Company's collaborative partners, and the period of time for which the Company's
existing capital  resources and future payments under  collaborative  agreements
will be sufficient to satisfy the Company's funding  requirements,  expectations
concerning  the  Company's  future  research  and  development  and  general and
administrative  expenses,  and the potential impact of the Year 2000 issue. Such
forward-looking  statements  involve risk and  uncertainties,  including without
limitation,  the risk  that the  Company's  collaborations  will be  terminated,
development candidates will not be identified,  development candidates which are
selected will not proceed through pre-clinical trials or will not prove safe and
effective  for  treatment of humans or animals in clinical  trials,  or that the
identification,  selection,  manufacture,  pre-clinical

                                      -7-

<PAGE>


testing, and clinical testing of development  candidates will take substantially
longer or be substantially  more expensive than contemplated by the Company,  or
that  the  Company  will not be able to  obtain  on a  timely  basis  government
regulatory clearance required for clinical testing, manufacturing, and marketing
of its products,  or that the Year 2000 issue will have a material impact on the
Company, and the other risks and uncertainties set forth in the Company's annual
report on Form 10-K for the year ended  December  31, 1998.  Actual  results and
timing of certain  events could differ  materially  from those  indicated in the
forward-looking statements as a result of these or other factors.


Results of Operations

Three Months Ended June 30, 1999 and June 30, 1998

Revenues.  Total  revenues for the second  quarter of 1999 were $1.5 million,  a
decrease  of 46% from the $2.8  million  in  revenues  recognized  in the second
quarter of 1998. Revenues were largely derived from corporate  partnerships with
Pfizer,  Daiichi and two affiliates of Johnson & Johnson ("J&J"). The decline in
comparative  revenues  during  these  periods was due to the  conclusion  of the
Daiichi collaboration at the end of the first quarter in 1999 and lower revenues
recognized from the J&J  collaboration,  partially offset by increased  revenues
from Pfizer related to the initiation of research under the Pfizer Animal Health
agreement.

Research and Development  Expenses.  Research and  development  expenses for the
second  quarter  decreased  approximately  6% from $4.8  million in 1998 to $4.5
million in 1999.  The  decrease  was due  primarily  to a decrease  in  research
expenses, outside consulting services and facilities expenses,  partially offset
by higher research  support  expenses  associated  with the Company's  antiviral
discovery  program  with  Iconix.  Research  and  development  expenses  are not
expected to materially change in the third quarter.

General and Administrative Expenses. General and administrative expenses for the
second quarter were  approximately  equal at $1.0 million in both 1999 and 1998.
General and administrative expenses are not expected to materially change in the
third quarter.

Interest  Income,  net.  Interest  income for the second quarter  decreased from
$504,000  in 1998 to $365,000  in 1999,  primarily  due to a decrease in average
cash balances. Interest expense for the second quarter increased from $12,000 in
1998 to $117,000 in 1999,  primarily due to an equipment  financing  arrangement
entered into at the end of 1998.

Six Months Ended June 30, 1999 and June 30, 1998

Revenues.  Total  revenues  for the  first  half of 1999 were  $4.2  million,  a
decrease of 28% from the $5.8 million in revenues  recognized  in the first half
of 1998. Revenues were largely derived from corporate  partnerships with Pfizer,
Daiichi  and two  affiliates  of  Johnson  & Johnson  ("J&J").  The  decline  in
comparative  revenues  during  these  periods was due to the  conclusion  of the
Daiichi collaboration at the end of the first quarter in 1999 and lower revenues
recognized from the J&J  collaboration,  partially offset by increased  revenues
from Pfizer related to the initiation of research under the Pfizer Animal Health
agreement and the sale of molecular diversity samples to Iconix Pharmaceuticals.
Revenues  related to the sale of  molecular  diversity  samples  to Iconix  were
exactly  offset by an increase in expenses  charged to  Microcide as part of the
antiviral research collaboration with Iconix.

Research and Development  Expenses.  Research and  development  expenses for the
first half decreased  approximately 7% from $9.9 million in 1998 to $9.2 million
in  1999.  The  decrease  was  due  primarily  to a  decrease  in  spending  for
facilities,  acquisitions of molecular  diversity,  and other research  expenses
associated  with  lower   headcount  in  support  of  the  Company's   corporate
collaborations and internal  programs.  These decreases were partially offset by
higher  research  support  expenses  associated  with  the  Company's  antiviral

                                      -8-

<PAGE>


discovery  program  with  Iconix.  Research  and  development  expenses  are not
expected to materially change in the second half of 1999.

General and Administrative Expenses. General and administrative expenses for the
first  half  were  approximately  equal at $2.0  million  in both 1999 and 1998.
General and administrative expenses are not expected to materially change in the
second half of 1999.

Interest  Income,  net.  Interest  income for the first half decreased from $1.0
million in 1998 to $775,000 in 1999, primarily due to a decrease in average cash
balances.  Interest expense for the first half increased from $30,000 in 1998 to
$188,000 in 1999  primarily due to an equipment  financing  arrangement  entered
into at the end of 1998.

Liquidity and Capital Resources

         The Company has  financed  its  operations  since  inception  primarily
through  the  sale  of  equity,   through  funds  provided  under  collaborative
agreements,  through other revenues principally consisting of sales of molecular
diversity  samples and through  equipment  financing.  As of June 30, 1999,  the
Company had received  approximately  $67.0 million in net proceeds from the sale
of equity, and approximately $43.9 million from license fees, milestone payments
and research support payments under collaborative agreements.

         Cash, cash equivalents and short-term investments at June 30, 1999 were
$25.4  million  compared to $33.2  million at December  31,  1998.  The decrease
during the first half of 1999 was due  primarily to cash used by  operations  of
$7.0  million,  $403,000  in  capital  expenditures  and  $513,000  utilized  in
financing activities which predominantly  consisted of principal payments on the
Company's  equipment  financing  arrangement.  This was offset by $91,000 in net
proceeds from the issuance of common stock.

         The Company  believes  that its existing  capital  resources,  interest
income and future  payments due under  collaborative  agreements will enable the
Company to maintain current and planned operations at least through 2000.

Impact of Year 2000

         The "Year 2000" issue  generally  describes the various  problems which
may  result  from  the   improper   processing   of  dates  and   date-sensitive
calculations.   Computers  and  other  equipment   containing   computer-related
components (such as programmable  logic  controllers and other embedded systems)
using two digits to identify  the year in a date may not be able to  distinguish
between  dates in the 20th  century  versus the 21st  century.  This issue could
cause  system or  equipment  malfunctions  resulting  in  material  and  adverse
interruptions in operations.

         The Company has begun to assess the  potential  impact of the Year 2000
computer problem on its computer systems, research equipment with embedded chips
or software,  and on the ability of third parties to supply  critical  materials
and services.  The Company has completed the assessment of its computer  systems
and believes them to be Year 2000 compliant. The Company expects to complete the
assessment  of its  embedded  systems and certain  third party  suppliers by the
third quarter of 1999,  and to take necessary  remediation  action by the end of
1999.  Expenditures to date have not been material and have consisted  solely of
the time of certain company personnel. Based on the partial assessment completed
through June 30, 1999, the Company does not currently expect the future costs of
completing  the assessment and making  equipment  modifications  to be material.
Although the Company  believes its key financial,  information  and  operational
systems are Year 2000  compliant,  there can be no assurances that other defects
will not be discovered in the future.  The Company is unable to control  whether
the firms and vendors it does business with currently,  and

                                      -9-

<PAGE>


in the future,  will have systems which are Year 2000  compliant.  The Company's
operations  could be  affected  to the extent  that firms and  vendors  would be
unable to provide  services or ship  products.  Management  does not believe the
Year  2000  changes  will have a  material  impact  on its  business,  financial
condition or results of operations. Because of this, the Company does not have a
formal  contingency  plan;  however,  if deemed  appropriate in the future,  the
Company would implement one.


ITEM 3. QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK

         The following  discussion  about the Company's  market risk  disclosure
involves  forward-looking  statements.  The  Company is  exposed to market  risk
related  mainly to changes in interest  rates.  The  Company  does not invest in
derivative financial instruments.

Interest Rate Sensitivity

         The fair value of the Company's investments in marketable securities at
June 30, 1999 was $24.1 million.  The Company's  investment  policy is to manage
its marketable  securities  portfolio to preserve  principal and liquidity while
maximizing  the return on the  investment  portfolio.  The Company's  marketable
securities  portfolio is primarily invested in corporate debt securities with an
average maturity of under one year and a minimum investment grade rating of A or
A-1 or better to minimize  credit risk.  Although  changes in interest rates may
affect  the  fair  value  of  the  marketable  securities  portfolio  and  cause
unrealized  gains or losses,  such gains or losses would not be realized  unless
the investments are sold prior to maturity.

Foreign Currency Exchange Risk

         At this time, the Company does not participate in any foreign  currency
exchange  activities,  therefore,  is not subject to risk of gains or losses for
changes in foreign exchange rates.

                                      -10-

<PAGE>


PART II      OTHER INFORMATION

Item 1.  Legal Proceedings

         None.


Item 2.  Changes in Securities

         None.


Item 3.  Defaults in Senior Securities

         None.


Item 4.  Submission of Matters to a Vote of Security Holders

     (a) The Annual Meeting of Stockholders of Microcide  Pharmaceuticals,  Inc.
         was held on June 24, 1999.

     (b) The following  Class III Directors  were elected to serve for a term of
         three  years  to  expire  at  the  Company's  2002  Annual  Meeting  of
         Stockholders:

         Name                       Position                      Term Expires
         ----                       --------                      ------------
         Keith A. Bostian, Ph.D.    Class III Director               2002
         James E. Rurka             Class III Director               2002


         The  following  Class  I and  II  Directors  continue  to  serve  their
         respective  terms  which  expire at the  Company's  Annual  Meeting  of
         Stockholders in the year as noted:

         Name                          Position                     Term Expires
         ----                          --------                     ------------
         Daniel L. Kisner, M.D.        Class I Director                 2000
         Hugh Y. Rienhoff, Jr., M.D.   Class II Director                2001
         David Schnell, M.D.           Class I Director                 2000
         Mark B. Skaletsky             Class I Director                 2000
         John P. Walker                Chairman, Class II Director      2001


     (c) The matters  voted upon at the meeting and the voting  results  were as
         follows:

         (i)    The  election  of two  Class III  Directors  for a term of three
                years:

         Name                        For            Against          Not Voted
         ----                        ---            -------          ---------
         Keith A. Bostian, Ph.D.   9,522,387         55,101          1,464,270
         James E. Rurka            9,520,981         56,507          1,464,270


         (ii)   Approval of amendment to the  Company's  1993 Amended  Incentive
                Stock  Plan,  increasing  the  number of shares of Common  Stock
                reserved for issuance from 2,280,000 to 2,580,000:

              For               Against            Abstain         Not Voted
              ---               -------            -------         ---------
            8,977,070           584,530             15,888         1,464,270

                                      -11-

<PAGE>


         (iii)  Approval of  amendment  to the  Company's  1996  Director  Plan,
                increasing  the number of shares of Common  Stock  reserved  for
                issuance from 80,000 to 150,000:

              For               Against            Abstain         Not Voted
              ---               -------            -------         ---------
            9,168,957           392,881             15,650         1,464,270

         (iv)   Approval of  amendment  to the  Company's  1996  Employee  Stock
                Purchase  Plan,  increasing the number of shares of Common Stock
                reserved for issuance from 120,000 to 220,000:

              For               Against            Abstain         Not Voted
              ---               -------            -------         ---------
            9,302,692           261,158             13,638         1,464,270

         (v)    Ratification  of  the  appointment  of  Ernst  &  Young  LLP  as
                independent  auditors  for the fiscal year ending  December  31,
                1999:

              For               Against            Abstain         Not Voted
              ---               -------            -------         ---------
            9,543,086            25,697              8,705         1,464,270


Item 5.  Other Information

         None.


Item 6.  Exhibits and Reports on Form 8-K

     (a) The following exhibits have been filed with this report:

         27.1  Financial Data Schedule

     (b) Reports on Form 8-K.

         No  reports on Form 8-K were filed  during the  quarter  ended June 30,
         1999.


                                      -12-

<PAGE>


                                   SIGNATURES

         Pursuant to the  requirements  of the Securities  Exchange Act of 1934,
the  registrant  has duly  caused  this report to be signed on its behalf by the
undersigned, thereunto duly authorized.


Dated:   August 16, 1999


                                           MICROCIDE PHARMACEUTICALS, INC.
                                           (Registrant)


                                           /s/  James E. Rurka
                                           -------------------------------------
                                           President, Chief Executive Officer,
                                           Acting Financial Officer and Director
                                           (principal executive officer and
                                           principal financial officer)

                                      -13-


<TABLE> <S> <C>


<ARTICLE>                     5
<CIK>                         0001010915
<NAME>                        MICROCIDE PHARMACEUTICALS, INC.
<MULTIPLIER>                  1,000
<CURRENCY>                    U.S. DOLLARS

<S>                             <C>
<PERIOD-TYPE>                   3-MOS
<FISCAL-YEAR-END>               DEC-31-1999
<PERIOD-START>                  APR-01-1999
<PERIOD-END>                    JUN-30-1999
<EXCHANGE-RATE>                       1
<CASH>                            9,743
<SECURITIES>                     15,661
<RECEIVABLES>                     1,318
<ALLOWANCES>                          0
<INVENTORY>                           0
<CURRENT-ASSETS>                 27,825
<PP&E>                           19,747
<DEPRECIATION>                  (10,985)
<TOTAL-ASSETS>                   37,498
<CURRENT-LIABILITIES>             3,129
<BONDS>                               0
                 0
                           0
<COMMON>                         66,993
<OTHER-SE>                      (35,120)
<TOTAL-LIABILITY-AND-EQUITY>     37,498
<SALES>                               0
<TOTAL-REVENUES>                  1,545
<CGS>                                 0
<TOTAL-COSTS>                     5,436
<OTHER-EXPENSES>                      0
<LOSS-PROVISION>                      0
<INTEREST-EXPENSE>                  117
<INCOME-PRETAX>                  (3,643)
<INCOME-TAX>                          0
<INCOME-CONTINUING>              (3,643)
<DISCONTINUED>                        0
<EXTRAORDINARY>                       0
<CHANGES>                             0
<NET-INCOME>                     (3,643)
<EPS-BASIC>                     (0.33)
<EPS-DILUTED>                     (0.33)



</TABLE>


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