KERN CAPITAL MANAGEMENT LLC
13F-HR, 1999-11-12
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                                  UNITED STATES
                       SECURITIES AND EXCHANGE COMMISSION
                             Washington, D.C. 20549

                                    Form 13F

                               Form 13F COVER PAGE

Report for the Calendar Year or Quarter Ended:  September 30, 1999

Check here if Amendment  [    ]; Amendment Number:

   This Amendment (Check only one.):

                         [     ] is a restatement.
                         [     ] adds new holdings entries.

Institutional Investment Manager Filing this Report:

Name:             Kern Capital Management LLC
Address:          114 W. 47th Street, Suite 1926
                  New York, NY  10036

Form 13F File Number:  28-6932

The institutional  investment  manager filing this report and the person by whom
it is signed hereby  represent  that the person signing the report is authorized
to  submit  it,  and all  information  contained  herein  is true,  correct  and
complete,  and  that it is  understood  that  all  required  items,  statements,
schedules, lists, and tables are considered integral parts of this form.

Person Signing this Report on Behalf of Reporting Manager:

Name:             John J. Crimmins
Title:            Senior Vice President, Chief Financial and Operating Officer
Phone:            212-944-4726

Signature, Place, and Date of Signing:

        /x/     John J. Crimmins           New York, NY              11/03/1999
                [Signature]                [City, State]             [Date]

Report Type (Check only one):

[  x  ]  13F HOLDINGS REPORT.  (Check if all holdings of this reporting
         manager are reported in this report.)

[     ]  13 F NOTICE.  (Check here if no holdings reported are in this report,
         and all holdings are reported by other reporting manager(s).)

[     ]  13F COMBINATION REPORT.  (Check here if a portion of the holdings
         for this  reporting  manager are  reported in this report and a portion
         are reported by other reporting manager(s).





                              Form 13F SUMMARY PAGE



         Report Summary:


         Number of Other Included Managers:                          0

         Form 13F Information Table Entry Total:                   113

         Form 13F Information Table Value Total:              $764,009


         List of Other Included Managers:                     None

<PAGE>

<TABLE>
<CAPTION>


                                                                  SHARES
                                                                  SH/PUT/
                                                        VALUE     PRN AMT    INVESTMENT    OTHER          VOTING AUTHORITY
NAME OF ISSUER            TITLE OF CLASS     CUSIP     (x1,000)   PRN CALL   DISCRETION    MANAGERS     SOLE     SHRD   NONE


- --------------------------------------------------------------------------------------------------------------------------------
<S>                        <C>               <C>        <C>      <C>          <C>     <C>             <C>       <C>    <C>


ACTV INC                   COMMON            00088E104    6810     488600 SH   SOLE                     392900   0       95700
ACTION PERFORMANCE COS     COMMON            004933107    1685      80000 SH   SOLE                      72400   0        7600
ACXIOM CORP                COMMON            005125109    1573      80000 SH   SOLE                      62500   0       17500
ADEPT TECHNOLOGY INC       COMMON            006854103    5252     724400 SH   SOLE                     724400   0           0
ADVANCE PARADIGM INC       COMMON            007491103    9149     167100 SH   SOLE                     151300   0       15800
AMERICAN CLASSIC VOYAGES   COMMON            024928103   15083     657550 SH   SOLE                     623450   0       34100
ANAREN MICROWAVE INC       COMMON            032744104   20018     708600 SH   SOLE                     671600   0       37000
ANCOR COMMUNICATIONS INC   COMMON            03332K108   11732     483800 SH   SOLE                     454800   0       29000
ANNTAYLOR STORES CORP      COMMON            036115103    6744     165000 SH   SOLE                     148900   0       16100
ANTEC CORP                 COMMON            03664P105    8319     156600 SH   SOLE                     140700   0       15900
ARGUSS HLDGS INC           COMMON            040282105    6776     459400 SH   SOLE                     459400   0           0
ARTHROCARE CORP            COMMON            043136100   30262     554000 SH   SOLE                     554000   0           0
AUDIOVOX CORP              CL A              050757103    7968     458600 SH   SOLE                     458600   0           0
BOSTON COMMUNICATIONS GR   COMMON            100582105    6096    1060100 SH   SOLE                    1060100   0           0
BUCA INC                   COMMON            117769109    3184     244900 SH   SOLE                     244900   0           0
CBT GROUP PUB LTD          DEPOSITORY RECEI  124853300    7860     319200 SH   SOLE                     283900   0       35300
CALIFORNIA AMPLIFIER INC   COMMON            129900106    9851     679400 SH   SOLE                     679400   0           0
CALPINE CORP               COMMON            131347106   28266     332300 SH   SOLE                     312100   0       20200
CAMERON ASHLEY BUILDING    COMMON            133290106     612      68000 SH   SOLE                      68000   0           0
CASH AMER INTL INC         COMMON            14754D100    4315     457200 SH   SOLE                     457200   0           0
CINAR CORP                 SUB VTG SHS B     171905300   22718     751000 SH   SOLE                     707500   0       43500
COMPUTER OUTSOURCING SVC   COMMON            205265101    2492     255600 SH   SOLE                     255600   0           0
CORPORATE EXECUTIVE BRD    COMMON            21988R102    5073     124500 SH   SOLE                     124500   0           0
CRITICAL PATH INC          COMMON            22674V100     403      10000 SH   SOLE                       7250   0        2750
CYTYC CORP                 COMMON            232946103   19100     493700 SH   SOLE                     465800   0       27900
DATALINK CORP              COMMON            237934104    5174     438000 SH   SOLE                     438000   0           0
DAVIDS BRIDAL INC          COMMON            238576102    3979     535000 SH   SOLE                     535000   0           0
DEB SHOPS INC              COMMON            242728103    5279     270700 SH   SOLE                     270700   0           0
DIGITAL LAVA INC           COMMON            253928105    1119     242000 SH   SOLE                     242000   0           0
E4L INC                    COMMON            268452109    2229     584600 SH   SOLE                     526900   0       57700
ELANTEC SEMICONDUCTOR IN   COMMON            284155108    5532     312750 SH   SOLE                     312750   0           0
EMULEX CORP                COM NEW           292475209   14152     164800 SH   SOLE                     146400   0       18400
EXIGENT INTERNATIONAL IN   COMMON            302056106    1822     462700 SH   SOLE                     462700   0           0
FAIRFIELD CMNTYS INC       COM PAR $0.01     304231301    1345     123000 SH   SOLE                      98000   0       25000
FIRST CASH FINL SVCS INC   COMMON            31942D107    1601     145500 SH   SOLE                     145500   0           0
FUSION MED TECHNOLOGIES    COMMON            361128101    1560     120000 SH   SOLE                     120000   0           0
GENE LOGIC INC             COMMON            368689105    3399     538500 SH   SOLE                     538500   0           0
GENELABS TECHNOLOGIES IN   COMMON            368706107    2813     989100 SH   SOLE                     989100   0           0
GENESCO INC                COMMON            371532102   10969     877500 SH   SOLE                     877500   0           0
GENESYS TELECOMMUNICATIO   COMMON            371931106    5199     113800 SH   SOLE                      90600   0       23200
GILEAD SCIENCES INC        COMMON            375558103    9878     153900 SH   SOLE                     141300   0       12600
GLOBAL INDS LTD            COMMON            379336100    2745     337900 SH   SOLE                     305100   0       32800
GO2NET INC                 COMMON            383486107    2674      41300 SH   SOLE                      36800   0        4500
HANOVER DIRECT INC         COMMON            410783104    3908    1525000 SH   SOLE                    1320000   0      205000
HOMESEEKERS COM INC        COMMON            437605108    9431     754500 SH   SOLE                     754500   0           0
IMAGE ENTMT INC            COM NEW           452439201    1862     405400 SH   SOLE                     405400   0           0
IMPCO TECHNOLOGIES INC     COM NEW           45255W106    9990     779700 SH   SOLE                     779700   0           0
INFORMATION RESOURCE ENG   COM PAR $0.01     45675F303   10450     499100 SH   SOLE                     499100   0           0
INTEGRATED MEASUREMENT S   COMMON            457923100    1890     147500 SH   SOLE                     147500   0           0
INTEGRALVISION INC         COMMON            45811H106     215     196400 SH   SOLE                     196400   0           0
INTERSPEED INC             COMMON            46070W107    9475     537600 SH   SOLE                     537600   0           0
INTERNET COM CORP          COMMON            460967102    3710     265000 SH   SOLE                     265000   0           0
JORE CORP                  COMMON            480815109    2805     235000 SH   SOLE                     235000   0           0
KOPIN CORP                 COMMON            500600101    5739     206800 SH   SOLE                     206800   0           0
MDSI MOBILE DATA SOLUTIO   COMMON            55268N100    8640     681000 SH   SOLE                     681000   0           0
MADDEN STEVEN LTD          COMMON            556269108    8798     680000 SH   SOLE                     680000   0           0
MCNAUGHTON APPAREL GROUP   COMMON            582524104    4088     467200 SH   SOLE                     467200   0           0
MEDICONSULT COM INC        COMMON            58469J100    6446     831750 SH   SOLE                     787450   0       44300
MICREL INC                 COMMON            594793101    5231     120600 SH   SOLE                     104800   0       15800
MILLER INDS INC TENN       COMMON            600551105    3501    1244700 SH   SOLE                    1244700   0           0
MODTECH HLDGS INC          COMMON            60783C100    1204     163300 SH   SOLE                     163300   0           0
MUSICMAKER COM INC         COMMON            62757C108    2885     279800 SH   SOLE                     253000   0       26800
NBTY INC                   COMMON            628782104    3763     493500 SH   SOLE                     445800   0       47700
NPC INTERNATIONAL INC      COMMON            629360306    3546     315200 SH   SOLE                     315200   0           0
NUCO2 INC                  COMMON            629428103    3225     586300 SH   SOLE                     586300   0           0
NABORS INDS INC            COMMON            629568106    2828     113100 SH   SOLE                      89900   0       23200
NATIONAL DATA CORP         COMMON            635621105    7431     285800 SH   SOLE                     256300   0       29500
NEOPHARM INC               COMMON            640919106    2857     193700 SH   SOLE                     193700   0           0
NET PERCEPTIONS INC        COMMON            64107U101    1735     101300 SH   SOLE                     101300   0           0
NETOPIA INC                COMMON            64114K104   40760    1022200 SH   SOLE                     974900   0       47300
NETRO CORP                 COMMON            64114R109    1218      44500 SH   SOLE                      35500   0        9000
NEW ERA OF NETWORKS INC    COMMON            644312100   14614     675800 SH   SOLE                     641900   0       33900
NEWPARK RES INC            COM PAR $.01NEW   651718504    3379     436000 SH   SOLE                     436000   0           0
NEWSEDGE CORP              COMMON            65249Q106    5201     562300 SH   SOLE                     562300   0           0
NORTHERN TECH INTL CORP    COMMON            665809109    2675     378800 SH   SOLE                     378800   0           0
NOVA CORP GA               COMMON            669784100    4056     162237 SH   SOLE                     150887   0       11350
NOVOSTE CORP               COMMON            67010C100    2871     160900 SH   SOLE                     160900   0           0
OPTIMARK TECHNOLOGIES      B CV PFD          683990204     500      50000 SH   SOLE                      50000   0           0
OPTIMARK TECHNOLOGIES      COMMON            683994107    1000     100000 SH   SOLE                     100000   0           0
ORTHODONTIC CTRS AMER IN   COMMON            68750P103    7191     412400 SH   SOLE                     373400   0       39000
OUTBACK STEAKHOUSE INC     COMMON            689899102    1910      75000 SH   SOLE                      67800   0        7200
OXFORD HEALTH PLANS INC    COMMON            691471106    2003     160200 SH   SOLE                     145800   0       14400
PEREGRINE SYSTEMS INC      COMMON            71366Q101    4605     113000 SH   SOLE                      90900   0       22100
PHOTON DYNAMICS INC        COMMON            719364101   15051     716700 SH   SOLE                     716700   0           0
PINNACLE HOLDINGS INC      COMMON            72346N101    3765     144100 SH   SOLE                     112900   0       31200
PIXAR                      COMMON            725811103    2457      65300 SH   SOLE                      52400   0       12900
POWERWAVE TECHNOLOGIES I   COMMON            739363109    2628      54500 SH   SOLE                      41900   0       12600
PRINCETON VIDEO IMAGE IN   COMMON            742476104    1031     220000 SH   SOLE                     220000   0           0
PROXIM INC                 COMMON            744284100     971      21100 SH   SOLE                      17000   0        4100
PUMA TECHNOLOGY INC        COMMON            745887109    6867     450300 SH   SOLE                     450300   0           0
QUEST SOFTWARE INC         COMMON            74834T103    1730      37200 SH   SOLE                      29600   0        7600
RARE MEDIUM GROUP INC      COMMON            75382N109   13251    1254500 SH   SOLE                    1212000   0       42500
RENT WAY INC               COMMON            76009U104   18289     962600 SH   SOLE                     916500   0       46100
ROWECOM INC                COMMON            77957X108    4718     170000 SH   SOLE                     170000   0           0
SBA COMMUNICATIONS CORP    COMMON            78388J106    4276     393200 SH   SOLE                     393200   0           0
SECURITY FIRST TECHNOLOG   COMMON            814279105    1711      44000 SH   SOLE                      35500   0        8500
SHUFFLE MASTER INC         COMMON            825549108    3554     430800 SH   SOLE                     430800   0           0
STERLING VISION INC        COMMON            859727109    1919     722500 SH   SOLE                     722500   0           0
SUNRISE ASSISTED LIVNG     COMMON            86768K106    5902     222200 SH   SOLE                     178800   0       43400
TELETECH HOLDINGS INC      COMMON            879939106   41083    2883000 SH   SOLE                    2680700   0      202300
TOPPS INC                  COMMON            890786106    5051     673500 SH   SOLE                     673500   0           0
24 / 7 MEDIA INC           COMMON            901314104    3367      88900 SH   SOLE                      77100   0       11800
UTI ENERGY CORP            COMMON            903387108    5792     298000 SH   SOLE                     298000   0           0
UNO RESTAURANT CORP        COMMON            914900105    2451     206400 SH   SOLE                     206400   0           0
VERISIGN INC               COMMON            92343E102   21513     202000 SH   SOLE                     187600   0       14400
VISTA INFORMATION SOLUTI   COM NEW           928365204     720     237600 SH   SOLE                     237600   0           0
WESLEY JESSEN VISIONCARE   COMMON            951018100   13493     432650 SH   SOLE                     432650   0           0
WINFIELD CAP CORP          COMMON            973859101    3049     180000 SH   SOLE                     167300   0       12700
WOMEN FIRST HEALTHCARE     COMMON            978150100    1074     152000 SH   SOLE                     152000   0           0
ZALE CORP NEW              COMMON            988858106    3985     104000 SH   SOLE                      82800   0       21200
ZIPLINK INC                COMMON            989741103    5334     508000 SH   SOLE                     508000   0           0
ZOMAX INC MINN             COMMON            989929104    3974     153600 SH   SOLE                     153600   0           0
ORCKIT COMMUNICATIONS LT   COMMON            M7531S107   24557     694200 SH   SOLE                     670400   0       23800


</TABLE>


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