CARDIODYNAMICS INTERNATIONAL CORP
S-3, 1999-10-01
ELECTROMEDICAL & ELECTROTHERAPEUTIC APPARATUS
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<PAGE>

As filed with the Securities and Exchange Commission on October 1, 1999
                                                 Registration No. 333-
- --------------------------------------------------------------------------------

                      SECURITIES AND EXCHANGE COMMISSION
                            Washington, D.C. 20549

                            ----------------------

                                   FORM S-3
                            REGISTRATION STATEMENT
                                     UNDER
                          THE SECURITIES ACT OF 1933

                            ----------------------

                   CARDIODYNAMICS INTERNATIONAL CORPORATION
            (Exact name of Registrant as specified in its charter)


            CALIFORNIA                                      95-3533362
   (State or other jurisdiction of                       (I.R.S. Employer
   incorporation or organization)                       Identification No.)

                            ----------------------

        6175 Nancy Ridge Drive, Suite 300, San Diego, California 92121
                                (619) 535-0202
   (Address, including zip code, and telephone number, including area code,
                 of Registrant's principal executive offices)

                            ----------------------

                               Michael K. Perry
                            Chief Executive Officer
                   CardioDynamics International Corporation
        6175 Nancy Ridge Drive, Suite 300, San Diego, California 92121
                                (619) 535-0202
          (Name, address, including zip code, and telephone number,
                  including area code, of agent for service)

                            ----------------------

                                   Copy to:

                             David R. Snyder, Esq.
                         Pillsbury Madison & Sutro LLP
                         101 West Broadway, Suite 1800
                          San Diego, California 92101

                            ----------------------

       Approximate date of commencement of proposed sale to the public:
  From time to time after the effective date of this Registration Statement.

                            ----------------------

If the only securities being registered on this Form are being offered pursuant
to dividend or interest reinvestment plans, please check the following box. [_]

If any of the securities being registered on this Form are to be offered on a
delayed or continuous basis pursuant to Rule 415 under the Securities Act of
1933, other than securities offered only in connection with dividend or interest
reinvestment plans, check the following box. [X]

If this Form is filed to register additional securities for an offering pursuant
to Rule 462(b) under the Securities Act, please check the following box and list
the Securities Act registration statement number of the earlier effective
registration statement for the same offering. [_]

If this Form is a post-effective amendment filed pursuant to Rule 462(c) under
the Securities Act, check the following box and list the Securities Act
registration statement number of the earlier effective registration statement
for the same offering. [_]

If delivery of the prospectus is expected to be made pursuant to Rule 434,
please check the following box. [_]

                        CALCULATION OF REGISTRATION FEE

<TABLE>
<CAPTION>
                                                           Proposed Maximum       Proposed Maximum
Title of Each Class of Securities        Amount To Be       Offering Price           Aggregate            Amount of
      To Be Registered                    Registered         Per Share(2)         Offering Price(2)    Registration Fee
- ------------------------------------------------------------------------------------------------------------------------
<S>                                    <C>                  <C>                   <C>                   <C>
common stock, no par value per share    305,772 shares(1)        2.82                  862,277              $239.71
- ------------------------------------------------------------------------------------------------------------------------
common stock, no par value per share    20,336 shares(1)         2.82                   57,432              $ 15.97
- ------------------------------------------------------------------------------------------------------------------------
Total                                   326,108 shares(1)                              919,709              $255.68
- ------------------------------------------------------------------------------------------------------------------------
</TABLE>

(1)  Includes (i) 305,702 shares of common stock, (ii) up to 20,336 shares of
     common stock to be issued upon the exercise of a Warrant to Purchase Stock
     and (ii) an indeterminate number of additional shares of common stock as
     may from time to time become issuable upon exercise of the Warrant to
     Purchase Stock by reason of stock splits, stock dividends and similar
     transactions, which shares are registered hereunder pursuant to Rule 416
     under the Securities Act.

(2)  Estimated solely for the purpose of computing  the amount of the
     registration fee in accordance with Rule 457 under the Securities Act of
     1933, as amended, based upon the average of the high and low prices of the
     common stock on September 26, 1999, as reported on the Nasdaq SmallCap
     Market.

     The Registrant hereby amends this Registration Statement on such date or
dates as may be necessary to delay its effective date until the Registrant shall
file a further amendment which specifically states that this Registration
Statement shall thereafter become effective in accordance with Section 8(a) of
the Securities Act of 1933 or until the Registration Statement shall become
effective on such date as the Commission, acting pursuant to said Section 8(a),
may determine.
- --------------------------------------------------------------------------------
<PAGE>

PROSPECTUS

                                326,108 SHARES

                   CARDIODYNAMICS INTERNATIONAL CORPORATION
                                 COMMON STOCK

     Our common stock is traded on the Nasdaq SmallCap Market under the symbol
"CDIC."  On September 30, 1999, the closing sale price of CardioDynamics common
stock as reported on the Nasdaq SmallCap Market was $[    ] per share.

     These shares of common stock are being sold by FIM Forte Fund, Richard
Jaffe, Georges Daou and William Walters, as selling shareholders.  The shares
are issuable to FIM Forte Fund upon exercise of a warrant at a price of $1.625
per share.  The warrant expires on June 17, 2002.  We issued the warrant to FIM
Forte Fund and the shares being sold by the other selling shareholders in
connection with their purchase of common stock issued upon conversion of
outstanding Series A preferred stock.  We will not receive any part of the
proceeds from the sale.


     See "Risk Factors" on page 3.

- --------------------------------------------------------------------------------

     Neither the Securities and Exchange Commission nor any state securities
commission has approved or disapproved of these securities or passed upon the
accuracy or adequacy of the prospectus.  Any representation to the contrary is a
criminal offense.

- --------------------------------------------------------------------------------

              The date of this prospectus is October  [  ], 1999.

                                      -1-
<PAGE>

                       WHERE YOU CAN FIND MORE INFORMATION

     We file annual, quarterly and special reports, proxy statements and other
information with the SEC.  You may read and copy any document we file at the
SEC's public reference rooms in Washington, D.C., New York, and Chicago.  Please
call the SEC at 1-800-SEC-0330 for further information on the public reference
rooms.  Our SEC filings are also available to the public at the SEC's web site
at http://www.sec.gov.

     The SEC allows us to "incorporate by reference" the information we file
with them which means that we can disclose important information to you by
referring you to those documents instead of having to repeat the information in
this prospectus.  The information incorporated by reference is considered to be
part of this prospectus, and later information that we file with the SEC will
automatically update and supersede this information.  We incorporate by
reference the documents listed below and any future filings made with the SEC
under Sections 13(a), 13(c), 14, or 15(d) of the Securities Exchange Act of 1934
until the selling shareholders sells all the shares.

     --  Annual Report on Form 10-KSB for the year ended November 30, 1998;

     --  Quarterly Reports on Form 10-QSB for the quarters ended February 28,
         1999 and May 31, 1999;

     --  Current Report on Form 8-K dated June 5, 1999 for an event on May 28,
         1999; and

     --  Registration Statement on Form 8-A filed with the SEC on April 19,
         1984. This filing describes the terms, rights and provisions applicable
         to our common stock.

You may request a copy of these filings, at no cost, by writing or telephoning
us at the following address:

     Shareholder Services
     6175 Nancy Ridge Drive, Suite 300
     San Diego, CA 92121
     (619) 535-0202

     You should rely only on the information incorporated by reference or
provided in this prospectus or any supplement.  We have not authorized anyone
else to provide you with different information.  The selling shareholders will
not make an offer of these shares in any state where the offer is not permitted.
You should not assume that the information in this prospectus or any supplement
is accurate as of any date other than the date on the front of those documents.

     This prospectus is part of a registration statement we filed with the SEC
(Registration No. 333-[           ]).

                  ABOUT CARDIODYNAMICS INTERNATIONAL CORPORATION

     At CardioDynamics International Corporation, we develop, manufacture and
market heart monitoring devices which provide physicians with continuous data on
a wide range of parameters relating to blood flow and heart function.  Unlike
other cardiac function monitoring technologies, our monitors are non-invasive.
Our primary products, the BioZ(R) System, the BioZ(TM) Portable, and the
BioZ.com(TM) use a technology called thoracic electrical bioimpedance to obtain
data which is typically available only through a time-consuming, costly, and
potentially dangerous invasive procedure known as right-heart catheterization,
or as pulmonary artery catheterization.

     Our principal executive offices are located at 6175 Nancy Ridge Drive,
Suite 300, San Diego, California 92121, and our telephone number is (619) 535-
0202.  Our common stock trades on the Nasdaq Stock Market(SM), under the symbol
CDIC.

                                      -2-
<PAGE>

                                   RISK FACTORS

     This offering involves a high degree of risk.  You should carefully
consider the risks described below and the other information contained in this
prospectus before deciding to invest in shares of our common stock.

DEPENDENCE ON BIOZ(R) Product Line Whose Market Acceptance is Unclear

     Our future is dependent upon the success of the BioZ(R) product line and
similar products that are based on the same technology. The market for thoracic
electrical bioimpedance products is in a relatively early stage of development,
and it is possible that this market will never fully develop. The long-term
commercial success of the BioZ(R) product line and any follow-on products
requires widespread acceptance of our thoracic electrical bioimpedance products
as safe, efficient, and cost-effective. Widespread acceptance would represent a
significant change in medical practice patterns. Historically, some medical
professionals have indicated hesitancy in using thoracic electrical bioimpedance
products such as analog-based monitors previously manufactured by us. Invasive
procedures, such as pulmonary artery catheterization, are generally accepted in
the medical community and have a long history of use.

     We have limited clinical data with which to demonstrate the clinical
benefits of our products. However, we have sponsored and plan to continue to
sponsor and/or conduct clinical trials that we hope will demonstrate consistent
clinical benefits resulting from the use of our products. We cannot be certain
that these clinical trials will be completed or if they will have a positive
outcome or if a positive outcome in these trials would be sufficient to enable
acceptance of the BioZ(R) product line by the medical community. We are unable
to predict whether, if at all, our products will be widely accepted by members
of the medical community.

     The following conditions may limit the accuracy of our products, such as:

     .    Severe shock;
     .    Aortic valve insufficiency;
     .    Very high blood pressure;
     .    Abnormal heart rhythms;
     .    Heart rates greater than 180 beats per minute;
     .    Patients who are shorter than 47";
     .    Patients who weigh less than 66 lbs.;
     .    Extreme patient movement.

     Failure of the BioZ(R) product line to gain widespread acceptance in the
medical community, and to maintain such acceptance, would negatively impact our
ability to stay in business.

HISTORY OF LOSSES AND EXPECTED CONTINUED LOSSES

     Since our emergence from bankruptcy proceedings in 1993, we have had large
annual losses in the course of researching, developing and enhancing our
technology and products and establishing our sales, marketing, and
administrative organizations.  We anticipate that our operating expenses will
increase substantially in the foreseeable future as we increase our sales and
marketing activities, expand our operations and continue the development of our
technology.  Accordingly, we expect to incur additional losses in the future and
it is possible that we will never achieve or sustain revenue growth or
profitability.

                                      -3-
<PAGE>

FUTURE ADDITIONAL CAPITAL REQUIREMENTS; NO ASSURANCE FUTURE CAPITAL WILL BE
AVAILABLE

     Commercialization of the BioZ(R) product line and the development and
commercialization of any additional products will require substantial
expenditures.  Our capital requirements will depend on numerous factors,
including:

     .    Our rate of sales growth--fast growth could actually increase our need
          for additional capital to hire additional staff, purchase additional
          component supplies, and supply additional support services;

     .    Our progress in marketing-related clinical evaluations and product
          development programs--these programs represent potential avenues for
          growth, but will require additional capital;

     .    Our receipt of, and the time required to obtain, regulatory clearances
          and approvals--the longer regulatory approval takes, the more working
          capital we need to support our regulatory and development efforts in
          advance of sales;

     .    Resources we devote to the development, manufacture and marketing of
          our products--any decision we make to improve, expand or simply change
          our process, products or technology will require increased funds;

     .    Resources required to hire and develop medical sales representatives
          and independent distributors and to develop internal manufacturing
          capacity--requires substantial working capital;

     .    Facilities requirements--as we grow we may need additional
          manufacturing, warehousing and administration facilities and the costs
          of the facilities would be borne long before any increased revenue
          from growth would occur;

     .    Market acceptance and demand for our products--although growth could
          increase our capital needs, the lack of growth and continued losses
          would also increase our need for capital; and

     .    Our ability to speed up hospitals' otherwise lengthy purchasing
          processes by offering leasing programs as an alternative to outright
          purchasing.

     The timing and amount of such capital requirements cannot be accurately
predicted.  We may be required to raise additional funds through public or
private financing, bank loans, collaborative relationships or other arrangements
earlier than expected.  It is possible that banks, venture capitalists and other
investors may perceive our current debt load, our history of losses or our
technology's lack of acceptance as too great a risk to bear and, as a result,
such additional funding may not be available on attractive terms, or at all.  If
we cannot obtain additional capital when needed we might be forced to agree to
unattractive finance terms, or to finance internally by discontinuing certain
operations, such as research and development, which we view as not essential to
day-to-day operations.  Such decisions could impair our ability to go forward
with our current plans, or at all.

COMPETITION FROM OTHER PRODUCERS; AND TECHNOLOGICAL CHANGE WHICH MAY BENEFIT OUR
COMPETITORS

     We compete with other companies that are developing and marketing non-
invasive hemodynamic monitors.  We are also subject to competition from
invasive-technology companies, including Baxter Healthcare Corporation, which
have more established and larger marketing and sales organizations,
significantly greater financial and technical resources and a larger installed
base of customers than we do.  Such competitors may be able to devote greater
resources to the development, promotion and sales of their products.

     The current widespread acceptance of pulmonary artery catheterization, and
lack of widespread acceptance of thoracic electrical bioimpedance, is an
important competitive disadvantage that we must overcome.  In addition, our
current and potential competitors may establish cooperative relationships with
large medical equipment companies to gain access to greater research and
development or marketing resources.  Competition may result in price reductions,
reduced gross margins and loss of market share.  Any of these could hurt our
business, results of operations and financial condition.  It is possible that we
will not be able to compete successfully.

     The introduction by others of products embodying new technologies and the
emergence of new industry standards could render our products obsolete and
unmarketable.  Other companies may develop and introduce

                                      -4-
<PAGE>

products and processes competitive with or superior to ours. In addition, other
technologies or products may be developed that have an entirely different
approach or means of accomplishing the intended purposes of our products.
Accordingly, our products' life cycles are difficult to estimate. To compete
successfully, we must continually develop and introduce new products that keep
pace with technological advancements, respond to evolving consumer requirements
and achieve market acceptance.

     We may not succeed in satisfactorily and timely developing and introducing
additional products.  Even if we succeed in developing and marketing products
that achieve market acceptance, our competitors may develop and market products
that will replace ours.

TECHNOLOGICAL CHANGE IS DIFFICULT TO PREDICT AND TO MANAGE

     Although not in fact a new company, we currently face many of the
challenges that are typically faced by new companies just emerging from the
development phase. The BioZ(R) product line has required, and any future
products will require, substantial development efforts and compliance with all
governmental clearance/approval requirements. We have to continue to build up
our sales and marketing functions. We may encounter unforeseen technological or
scientific problems that may force abandonment or substantial change in the
development of a specific product or process. Technological change or product
developments by others may also have a significant negative effect on us.

ABILITY TO MANAGE GROWTH

     If successful, we will experience a period of growth that could place a
significant strain upon our managerial, financial and operational resources.
Our infrastructure, procedures and controls may not be adequate to support our
operations and to achieve the rapid execution necessary to fully exploit any
future market opportunity for our products.  Our future operating results will
also depend on our ability to complete our geographic network of direct sales
persons and distributors, expand our sales and marketing organizations, and fill
out our support staff organization.  If we are unable to manage expansion
effectively, our business, results of operations and financial condition will
suffer.  However, we are not promising you that such expansion or growth will
occur.

CONTROL BY OUR CO-CHAIRMEN

     Allen E. Paulson and James C. Gilstrap, the co-chairmen of CardioDynamics,
beneficially own, directly or through CardioDynamics Holdings, LLC, which they
control, approximately 45% of the outstanding shares of our common stock
(including shares owned by others which CardioDynamics Holdings, LLC has the
right to vote).  In addition, Mr. Paulson's sons beneficially own another 7% of
the outstanding shares of common stock.  Accordingly, Messrs. Paulson and
Gilstrap, as a group, are able to control CardioDynamics and direct our affairs
and business, including any future issuances of common stock or other
securities, merger and acquisition decisions, declaration of dividends and the
election of directors.  Further, in their position as holders of our stock, they
have no duty to act in the best interests of CardioDynamics.  Our stock price
and our ability to raise capital could be injured if they were to sell even a
portion of their holdings on the open market.

WE MAY NOT CONTINUE TO RECEIVE NECESSARY APPROVALS FROM THE FOOD AND DRUG
ADMINISTRATION

     Our products and activities are subject to extensive regulation by the FDA
and other governmental authorities.  Delays in receipt of, or failure to obtain,
regulatory clearances and approvals, or any failure to comply with regulatory
requirements, could have a very negative effect on our business.

     Our thoracic electrical bioimpedance products are subject to extensive and
rigorous regulation by the FDA and, to varying degrees, by state and foreign
regulatory agencies.  Under the federal Food, Drug, and Cosmetic Act (the "FDC
Act"), the FDA regulates the clinical testing, manufacture, labeling, packaging,
marketing, distribution and record keeping for medical devices, in order to
ensure that medical devices distributed in the United States are safe and
effective for their intended use.

     Before a new device can be introduced into the market, the manufacturer
generally must obtain either FDA 510(k) clearance or approval of a pre-market
approval application.  Following submission of a 510(k) or PMA application, the
manufacturer may not market the new device until an order is issued by the FDA
granting clearance

                                      -5-
<PAGE>

or approval, which can entail an expensive, lengthy and uncertain process. We
have received a marketing clearance for the BioZ(R) System, the BioZ(TM)
Portable and the BioZ.com(TM). However, such clearances are subject to continued
FDA audits and can be rescinded. Further, we plan to submit additional new
products for FDA approval in the future. It is possible that our future products
might not gain FDA approval in a timely fashion, or at all. It is also possible
that our current products may someday lose their FDA approval.

     We are also subject to routine inspection by the FDA and state agencies,
such as the California Department of Health Services, for compliance with Good
Manufacturing Practice (GMP) requirements, Medical Device Reporting requirements
and other applicable regulations.  Although we work hard at attempting to comply
with all governmental regulations, it is possible that an inspector could
someday find a violation.  Such a violation could result in government action
ranging from warning letters to fines to criminal prosecution.  Should we ever
incur a significant penalty it is possible it would be detrimental to us.  The
FDC Act requires that medical devices be manufactured in accordance with Good
Manufacturing Practice requirements.

     Good Manufacturing Practice requirements specify, among other things, that:

     .    the manufacturing process be regulated and controlled by the use of
          written procedures;

     .    the ability to produce devices which meet the manufacturer's
          specifications be validated by the extensive and detailed testing of
          every aspect of the process; and

     .    any deficiencies in the manufacturing process or in the products
          produced be investigated and detailed records kept.

     Manufacturing facilities are subject to FDA inspection on a periodic basis
to monitor compliance with current GMP requirements.  Labeling and promotional
activities are regulated by the FDA and, in certain circumstances, by the
Federal Trade Commission.  Current FDA enforcement policy prohibits the
marketing of approved medical devices for unapproved uses.  For any medical
device cleared through the 510(k) process, modifications or enhancements that
could significantly affect the safety or effectiveness of the device or that
constitute a major change to the intended use of the device require a new 510(k)
submission.  If the FDA requires us to submit a new 510(k) notice for any
product modification, we may be prohibited from marketing the modified product
until the 510(k) notice is cleared by the FDA.

     The FDA regulates computer software that performs the function of a
regulated device or that is intimately associated with a given device, such as
control software for diagnostic devices like our products.  The FDA is
reevaluating its regulation of such software, and if the FDA undertakes
increased or more rigorous regulation of such software, the BioZ(R) product line
and related products may become subject to further regulatory processes and
clearance requirements.

     Laws and regulations regarding the manufacture, sale and use of medical
devices are subject to change and depend heavily on administrative
interpretations.  Future changes in the regulations or interpretations made by
the FDA or other regulatory bodies, with possible retroactive effect, may
adversely affect us.


WE MAY NOT RECEIVE APPROVALS BY FOREIGN REGULATORS WHICH ARE NECESSARY FOR
FOREIGN SALES

     Sales of medical devices outside of the United States are subject to
foreign regulatory requirements that vary from country to country.  If we or our
international distributors fail to obtain or maintain required pre-market
approvals or fail to comply with foreign regulations, foreign regulatory
authorities may require us to file revised governmental notifications, cease
commercial sales of our products in the applicable countries, or otherwise cure
the problem   Such enforcement action by regulatory authorities could be costly.

     In order to sell our products within the European Economic Area, we have to
comply with the European Commission's Medical Device Directive and to affix a
"CE" marking on our products to attest such compliance.  In November 1998 we
received authorization from TUV Rhineland of North America to place the CE Mark
on our BioZ.com(TM).  However, future regulatory changes could limit our ability
to use the CE mark and any new products we develop may not qualify for the CE
mark.  Failure to obtain authorization to use the CE mark or loss of such

                                      -6-
<PAGE>

authorization would render us unable to sell our products in the European
Economic Area and this would limit our potential.

THIRD-PARTY REIMBURSEMENT; PRICING PRESSURES

     Our commercial success will depend in part on the availability of adequate
reimbursement from third-party healthcare payers, such as government and private
health insurers and managed care organizations.  Third-party payers are
increasingly challenging the pricing of medical products and services.  Even
with an FDA approved device, third-party payers may not cover the device and
related services, or they may place significant restrictions on the
circumstances in which coverage will be available. Medicare reimbursement for
use of the BioZ(R) product line is now available under the heading of
plethysmography, but private third-party payers are not required to follow
Medicare's lead.  We may not be able to obtain a specific code for reimbursement
of thoracic electrical bioimpedance tests in a reasonable time frame, or at all,
from either Medicare or private third-party payers.  In addition, reimbursement
may not be at or stay at price levels sufficient to allow medical professionals
to realize an appropriate return on an investment in our products.  Downward
pricing pressure in the industry could hurt our operations.

     Our business plan contemplates an income stream from sales of disposable
sensors which are compatible with an installed base of our monitors.  We may
be subject to price competition from other sensor manufacturers.

DEPENDENCE ON MANAGEMENT AND OTHER KEY PERSONNEL

     We are dependent upon a limited number of key management and technical
personnel and we do not have insurance on these people.  The loss of the
services of one or more of such key employees could hurt our business.  In
addition, our success depends upon our ability to attract and retain additional
highly qualified sales, management, manufacturing and research and development
personnel.  We face intense competition in our recruiting activities and we may
not be able to attract and/or retain qualified personnel.

DEPENDENCE ON RIVERTEK MEDICAL SYSTEMS FOR DEVELOPMENT SERVICES AND OTHER THIRD
PARTIES FOR DEVELOPMENT AND MANUFACTURING SERVICES

     Our strategy for development and commercialization of certain of our
products depends upon entering into various arrangements with third parties and
upon the subsequent success of these parties in performing their obligations. It
is possible that we will not be able to negotiate acceptable arrangements in the
future or that our existing arrangements will not be successful. We rely heavily
on contracted development services, particularly from Rivertek Medical Systems,
Inc. Also, we currently assemble our BioZ(R) product line from components
manufactured by others. Therefore, we are dependent on contract manufacturers.

SMALL MARKET FLOAT CAN PRODUCE BOTH STOCK PRICE VOLATILITY AND A POTENTIAL LACK
OF LIQUIDITY

     Market float is the aggregate value of all of a company's publicly traded
stock.  Our market float is smaller than that of many other publicly traded
companies.  Because our market float is smaller, changes in the opinion of one
investor or one analyst can have a significant effect on our stock price.  As a
result, the market price of our common stock is likely to be highly volatile and
could be subject to wide fluctuations in response to various factors beyond our
control, including:

     .    Quarterly variations in operating results;

     .    Announcements of technological innovations, new products or pricing by
          our competitors;

     .    Changes in, or failure to meet, financial estimates of securities
          analysts;

     .    The rate of adoption by physicians of thoracic electrical bioimpedance
          technology in targeted markets;

     .    Timing of patent and regulatory approvals;

                                      -7-
<PAGE>

     .    Timing and extent of technological advancements;

     .    Results of clinical studies;

     .    The sales, by the Selling Shareholders or other persons, of derivative
          securities relating to CardioDynamics stock such as entering into
          short sales contracts which obligate the party to sell their shares
          for less than current market value in the future;

     .    General market conditions.

In addition, the stock market has experienced significant price and volume
fluctuations that have affected the market prices of the stock of many medical
device companies and that often have been unrelated to the operating performance
of such companies.  These broad market fluctuations may directly influence the
market price of our common stock.  Our somewhat small market float may not be
entirely adequate to provide market liquidity and mitigate stock price
volatility.

RELIANCE ON PATENTS AND PROPRIETARY TECHNOLOGY

     Although we believe that we have effective patent protection, our patents
and proprietary technology may not be able to prevent effective competition by
others and our products could possibly be found to infringe the rights of
others.  Intellectual property litigation, whether defensive or offensive, would
have no certain outcome other than to drain our resources.

     The validity and breadth of claims in medical technology patents involve
complex legal and factual questions.  Future patent applications may not be
issued, the scope of any patent protection may not exclude competitors and it
may not provide competitive advantages to us.  Further, our patents may be found
to be invalid, and other companies may claim rights in or ownership of the
patents and other proprietary rights held or licensed by us.  Also, our existing
patents might not cover products we want to bring out in the future.  Moreover,
when our key patents expire, the inventions will enter the public domain.

     Since patent applications in the United States are maintained in secrecy
until patents issue, our patent applications may infringe patents that may be
issued to others.  In the event our products are found to infringe patents held
by competitors, we may have to modify our product to avoid infringement, and it
is possible that our modified products would not be commercially successful.

WE COULD BE REQUIRED TO ISSUE ADDITIONAL SHARES OF COMMON STOCK

     The holders of warrants to purchase our common stock and certain purchasers
of our common stock in our May 1999 private placement could require us to issue
additional shares of common stock to them pursuant to anti-dilution rights we
have provided them.  These rights would cause us to issue additional common
stock upon exercise of their warrants if we sell common stock at a price less
than the exercise price of their warrants or issue additional common stock to
the purchasers in the private placement if the market price falls below certain
target levels.  If we need to sell common stock at a time when the market price
for our shares is depressed, these anti-dilution rights could further depress
the market price and could, in turn, impair our ability to raise needed capital.

ANTICIPATED RESALES OF  COMMON STOCK

     We have filed or will file registration statements with the SEC covering
the potential resale by certain shareholders of up to 9,750,000 shares of common
stock (including the shares subject to this prospectus).  The existence of a
substantial number of shares of common stock subject to immediate resale could
depress the market price for the common stock and, in turn, impair our ability
to raise needed capital.

LOW STOCK PRICE COULD RESULT IN OUR BEING DE-LISTED FROM NASDAQ AND SUBJECT US
TO REGULATIONS WHICH COULD REDUCE OUR ABILITY TO RAISE FUNDS

     If our stock price were to drop below $1.00 per share and remain below
$1.00 per share for an extended period of time, certain NASDAQ regulations would
require the de-listing of our shares and then our shares could no

                                      -8-
<PAGE>

longer be traded on NASDAQ. In such an event, our shares could only be traded on
over-the-counter bulletin board systems. This method of trading could
significantly impair or completely remove our ability to raise new capital.

     In the event that we were de-listed from NASDAQ due to low stock price, we
might be subject to certain rules, called penny stock rules, that impose
additional sales practice requirements on broker-dealers who sell such
securities.  For any transaction involving a penny stock the rules require,
among other things, the delivery, prior to the transaction, of a disclosure
schedule required by the SEC relating to the market for penny stocks.  The
broker-dealer also must disclose the commissions payable both to the broker-
dealer and the registered representative and current quotations for the
securities, and monthly statements must be sent disclosing recent price
information.

     In the event our common stock becomes characterized as a penny stock, our
market liquidity could be severely affected.  In such event, the regulations
relating to penny stocks could limit the ability of broker-dealers to sell our
common stock and thus, the ability of purchasers in this offering to sell their
common stock in the secondary market.

RISKS ASSOCIATED WITH INTERNATIONAL ACTIVITIES

     We believe it is possible that international sales will represent a
meaningful portion of revenue in the future (in fiscal 1998 international sales
accounted for approximately 15% of our revenue).  This would require significant
management attention and financial resources and subject us to the risks of
selling internationally.  These risks include unexpected changes in regulatory
requirements, tariffs and other barriers and restrictions, and an adverse effect
from reduced protection for intellectual property rights.  We would have to
comply with a variety of foreign laws.  In addition, fluctuations in the rates
of exchange could increase the price in local currencies of our products in
foreign markets and make our products relatively more expensive than
competitors' products that are denominated in local currencies.

PRODUCT LIABILITY RISK AND PRODUCT RECALL; LIMITED INSURANCE COVERAGE

     The nature of our business exposes it to risks of product liability or
product recalls that are typical in the medical devices industry.  Medical
devices as complex as ours frequently contain errors or failures, especially
when first introduced or when new versions are released.  Our products are
designed to be used in certain procedures where there is a high risk of serious
injury or death.  Such risks will exist even with respect to those products that
have received, or may in the future receive, regulatory clearance for commercial
sale.

     We did not carry product liability insurance during certain periods before
May 15, 1995.  So far, this has not hurt us.  Since then, we have maintained
product liability insurance at levels that we believe are sufficient and
consistent with industry standards for companies with our current sales levels.
We intend to increase our product liability insurance policy limits as sales
grow.  Currently, our product liability insurance policy limits are $5,000,000
per occurrence and $5,000,000 in the aggregate.  Our product liability insurance
may not be adequate and it is possible that such insurance coverage may not
continue to be available on commercially reasonable terms or at all.  In
addition, product liability claims or recalls could hurt us in various ways even
if we have adequate insurance coverage.

UNCERTAINTY AND POTENTIAL NEGATIVE EFFECTS OF HEALTHCARE REFORM

     The healthcare industry is undergoing fundamental changes resulting from
political, economic and regulatory influences.  In the United States,
comprehensive programs have been proposed that seek to:

     .    Increase access to health care for the uninsured;

     .    Control the escalation of healthcare expenditures within the economy;

     .    Use of health care reimbursement policies to help balance the federal
          budget.

We anticipate that Congress and state legislatures will continue to review and
assess such proposals, and public debate of these issues will likely continue.
We cannot predict which, if any, of such reform proposals will be adopted and
when they might be adopted.  Other countries also are considering healthcare
reform.  Significant

                                      -9-
<PAGE>

changes in healthcare systems could have a substantial impact on the manner in
which we conduct our business and could disrupt our strategies.

NO DIVIDENDS

     We do not intend to pay any cash dividends on the common stock any time
soon.  Payment of such cash dividends would, in any event, be prohibited or
limited under the terms of our bank loans.

YEAR 2000 RISKS

     Many computer systems experience problems handling dates beyond the year
1999.  This issue will impact virtually any business that relies on computers.
In addition to our own potential problems, there are governmental agencies,
financial institutions, utilities and other basic service providers that may
encounter problems that are outside of our control. In order to correct this
issue, some computer hardware and software will need to be modified prior to the
year 2000 in order for it to remain functional. We have taken steps to assess
the internal readiness of our computer systems and the compatibility of our
products for handling the year 2000 issue. We have created a Year 2000 task
force which is addressing these issues. The project has been broken down into
the following phases.


     .    Awareness: To create awareness of the potential business implications
          of the Year 2000 challenge within CardioDynamics. Our employees, when
          appropriate, will be kept informed of the news and issues related to
          the Year 2000 issue. We have focused on both our information
          technology systems as well as our products.

     .    Inventory and Assessment: We have inventoried all of our computer
          software and hardware as well as facilities, telecommunications, and
          external interfaces. Significant third party vendors will be contacted
          to determine their Year 2000 readiness.

     .    Renovation: As problems are discovered, strategies will be developed
          to either correct the problem or determine if new equipment or
          software is necessary.

     .    Testing: Testing of our systems will continue to occur to determine
          whether they are performing reliably under Year 2000 conditions. All
          of our internal systems and workstations have been successfully tested
          for Year 2000 compliance.

     .    Implementation: Upon successful completion of the testing process the
          assets will be reintroduced into production in order to allow adequate
          time to prevent any unforeseen circumstances.


As of August 31, 1999 we have completed the awareness and inventory and
assessment stages and anticipate completing any necessary renovation, testing
and implementation within the next two months.  We have already determined that
our internal information systems, including individual workstations and our
manufacturing requirements planning system, are certified as Year 2000
complaint.  Additionally, our newest products have been specifically tested for
Year 2000 performance and no significant Year 2000 problems have been
identified.  We are still in the process of certifying key third party vendors'
Year 2000 compliance.  Renovation and testing has begun as problems are
identified.  In addition, we have and continue to consider contingency plans in
the event that our internal systems, products or suppliers are not Year 2000
compliant.


We plan to have all stages of the Year 2000 project completed no later than the
fall of 1999.  Thus far, we have not had to spend significant amounts of money
through this stage of the process.  We currently believe that the cost of
addressing this issue will be less than $50,000 and will not have a significant
effect on us.  Based on our assessments, the most likely worst case scenario
could include:  vendors of our most important goods and services, or suppliers
of our necessary energy, telecommunications and transportation needs, failing to
provide us with the materials and services which are necessary to produce and
sell our products.

                                      -10-
<PAGE>

                            FORWARD-LOOKING STATEMENTS

     This prospectus and the documents incorporated by reference into this
prospectus contain forward-looking statements that are based on current
expectations, estimates and projections about our industry, management's
beliefs, and assumptions made by management.  Words such as "anticipates,"
"expects," "intends," "plans," "believes," "seeks," "estimates," and variations
of such words and similar expressions are intended to identify such forward-
looking statements.  These statements are not guarantees of future performance
and are subject to certain risks, uncertainties and assumptions that are
difficult to predict; therefore, actual results may differ materially from those
expressed or forecasted in any forward-looking statements.  Such risks and
uncertainties include those noted in "Risk Factors" above and in the documents
incorporated by reference.  We undertake no obligation to update publicly any
forward-looking statements, whether as a result of new information, future
events or otherwise.

                                 USE OF PROCEEDS

     We will not receive any of the proceeds from the sale of shares of our
common stock by the selling shareholders.

                               SELLING SHAREHOLDERS

     In June 1999, former holders of our Series A preferred stock sold common
stock issued upon the conversion of their Series A preferred stock to FIM Forte
Fund, Richard Jaffe, Georges Daou and William Walters, the selling shareholders.
We identified the selling shareholders and facilitated the private sale of the
common stock to them in order to achieve an orderly conversion of the Series A
preferred stock with a minimum impact on the market price of our common stock.
In connection with this sale, we issued a warrant to purchase up to 20,336
shares of common stock to FIM Forte Fund at an exercise price of $1.625 per
share and an aggregate of 305,772 shares of our common stock to Messrs. Walters,
Jaffe and Daou.  The warrant expires on June 17, 2002.

     Except as otherwise indicated in this prospectus, the selling shareholders
have not had a material relationship with us within the past three years other
than as a result of ownership of our securities.  The numbers set forth in the
column "Number of Shares Being Offered" below constitute all of the shares that
the selling shareholders may distribute in this offering; however, there are
currently no agreements, arrangements or understandings with respect to the sale
of any of the shares and the table below assumes the sale of all shares.  The
shares are being registered to permit public secondary trading of the shares,
and the selling shareholders may offer the shares for resale from time to time
after the shares are issued upon exercise.

     In connection with the receipt of the shares, each selling shareholder
represented that it was acquiring the shares for investment and not with a view
to distributing our common stock, and that the selling shareholder was an
accredited investor, as defined in Rule 501(a) under the Securities Act.  We
agreed that the shares issuable upon exercise of the warrant by FIM Forte Fund
and the shares purchased by the other selling shareholders would be registered
for resale in a Registration Statement.  We are required to bear all
registration expenses other than fees and expenses of counsel for the selling
shareholders and underwriting discounts and commissions and brokerage
commissions and fees.  Accordingly, we filed with the Commission a Registration
Statement on Form S-3, of which this Prospectus forms a part, with respect to
the resale of the shares from time to time. We also agreed to prepare and file
such amendments and supplements to the Registration Statement as may be
necessary to keep the Registration Statement effective until all of our common
stock offered hereby has been sold or until the shares are no longer, by reason
of Rule 144 under the Securities Act, required to be registered for resale.

                                      -11-
<PAGE>

     The following table sets forth the name of the selling shareholders and the
number of shares which may be offered pursuant to this Prospectus.


                                                              Number of
                                                            Shares Being
         Selling Shareholders                                  Offered
         --------------------                               ------------
         FIM Forte Fund                                         20,336
         Richard Jaffe                                          25,595
         Georges Daou                                           25,595
         William Walters                                       254,582
                                                               =======
                            TOTAL                              326,108


                             PLAN OF DISTRIBUTION

     We are registering the shares on behalf of the selling shareholders and any
donees and pledgees who may  sell shares received from the named selling
shareholders after the date of this Prospectus.  All costs, expenses and fees in
connection with the registration of the shares offered hereby (other than
certain fees and expenses of the selling shareholders' counsel) will be borne by
us.  Brokerage commissions and similar selling expenses, if any, attributable to
the sale of shares will be borne by the selling shareholders.  Sales of shares
may be effected by the selling shareholders from time to time in one or more
types of transactions (which may include block transactions) on the Nasdaq
SmallCap Market, in the over-the-counter market, in negotiated transactions,
through put or call transactions relating to the shares, through short sales of
shares, or a combination of such methods of sale, at market prices prevailing at
the time of sale, or at negotiated prices.  Such transactions may or may not
involve brokers or dealers.  Each selling shareholder has advised us that it has
not entered into any agreements, understandings or arrangements with any
underwriters or broker-dealers regarding the sale of its securities, nor is
there an underwriter or coordinating broker acting in connection with the
proposed sale of shares by the selling shareholders.

     The selling shareholders may effect such transactions by selling shares
directly to purchasers or to or through broker-dealers, which may act as agents
or principals.  Such broker-dealers may receive compensation in the form of
discounts, concessions, or commissions from the selling shareholders and/or the
purchasers of shares for whom such broker-dealers may act as agents or to whom
they sell as principal, or both (which compensation as to a particular broker-
dealer might be in excess of customary commissions).

     The selling shareholders and any broker-dealers that act in connection with
the sale of shares might be deemed to be "underwriters" within the meaning of
Section 2(11) of the Securities Act, and any commissions received by such
broker-dealers and any profit on the resale of the shares sold by them while
acting as principals might be deemed to be underwriting discounts or commissions
under the Securities Act.  The selling shareholders may agree to indemnify any
agent, dealer or broker-dealer that participates in transactions involving sales
of the shares against certain liabilities, including liabilities arising under
the Securities Act.

     Because the selling shareholders may be deemed to be "underwriters" within
the meaning of Section 2(11) of the Act, the selling shareholders will be
subject to the prospectus delivery requirements of the Securities Act.  We have
informed the selling shareholders that the anti-manipulative provisions of
Regulation M promulgated under the Exchange Act may apply to its sales in the
market.

     The selling shareholders also may resell all or a portion of the shares in
open market transactions in reliance upon Rule 144 under the Securities Act,
provided it meets the criteria and conforms to the requirements of such Rule.

     When any selling shareholder notifies us that a material arrangement has
been entered into with a broker-dealer for the sale of shares through a block
trade, special offering, exchange distribution or secondary distribution or a
purchase by a broker or dealer, a supplement to this Prospectus will be filed,
if required, pursuant to Rule 424(b) under the Securities Act, disclosing (i)
the name of the selling shareholder and of the participating broker-dealer(s),
(ii) the number of shares involved, (iii) the price at which such shares were
sold, (iv) the commissions paid

                                      -12-
<PAGE>

or discounts or concessions allowed to such broker-dealer(s), where applicable,
(v) that such broker-dealer(s) did not conduct any investigation to verify the
information set out or incorporated by reference in this Prospectus and (vi)
other facts material to the transaction. In addition, when any selling
shareholder notifies us that a donee or pledgee intends to sell more than 500
shares, we will file a supplement to this Prospectus.

     In order to comply with the securities laws of certain states, if
applicable, the shares may be sold in such jurisdictions only through registered
or licensed brokers or dealers.  In addition, in certain states the shares may
not be sold unless they have been registered or qualified for sale or an
exemption from registration or qualification requirements is available and is
complied with.

                                  LEGAL MATTERS

     Our outside law firm, Pillsbury Madison & Sutro LLP, San Diego, California
will issue an opinion about the legality of the shares.

                                     EXPERTS

     The financial statements of CardioDynamics International Corporation as of
November 30, 1998 and 1997, and for the years then ended, have been incorporated
by reference herein and in the registration statement in reliance upon the
report of KPMG LLP, independent certified public accountants, incorporated by
reference herein, and upon the authority of said firm as experts in accounting
and auditing.

                                 INDEMNIFICATION

     Section 317 of the California General Corporation Law allows companies to
indemnify their officers and directors against expenses, judgments, fines and
amounts paid in settlement under certain conditions and subject to certain
limitations.

     Article Three of our Bylaws provides that we shall indemnify any person who
is or was a director, officer, employee or agent of ours, or any person who is
or was serving at our request as a director, officer, employee or agent of
another corporation, subject to certain limitations.  In addition, expenses
incurred by a director, officer, employee or agent in defending a lawsuit by
reason of that person's relationship with us, may be paid by us in advance of
the final disposition of such lawsuit after we receive an undertaking by or on
behalf of such person to repay such amount if it shall ultimately be determined
that he or she is not entitled to be indemnified by us.

     Our Articles of Incorporation, as amended, provide that none of our
directors shall be liable for monetary damages in an action by or in
CardioDynamics' right for breach of a director's duties to us and our
shareholders, as set forth in Section 309 of the California Corporations Code.
However, such provision does not eliminate or limit the liability of a director:

     (i)    for acts or omissions that involve intentional misconduct or knowing
            or culpable violation of law;

     (ii)   for acts or omissions that a director believes to be contrary to our
            best interests or those of our shareholders or that involve the
            absence of good faith on the part of a director;

     (iii)  for any transaction from which a director derives an improper
            personal benefit;

     (iv)   for acts or omissions that show a reckless disregard of the
            director's duty in circumstances in which the director was aware, or
            should have been aware in the ordinary course of performing the
            director's duties, of a risk of serious injury to us or to our
            shareholders;

     (v)    for acts or omissions that constitute an unexecuted pattern of
            inattention that amounts to an abdication of the director's duty to
            us;

     (vi)   under Section 310 of the California Corporations Code; or

                                      -13-
<PAGE>

     (vii)  under Section 316 of the California Corporations Code.

Such provision eliminating liability does not eliminate or limit the liability
of an officer for any act or omission as an officer notwithstanding that the
officer is also a director or that his or her actions, if negligent or improper,
have been ratified by the directors.

     We are authorized to provide indemnification of our agents (as defined in
Section 317 of the California Corporations Code) for breach of duty to us and
our shareholders through bylaw provisions or through agreements with the agents,
or both, in excess of the indemnification otherwise permitted by Section 317 of
the California Corporations Code, subject to the limits on such excess
indemnification set forth in Section 204 of the California Corporations Code.
We have entered into such indemnification agreements with each of our directors
and officers.

     Insofar as indemnification for liabilities arising under the Securities Act
of 1933 may be permitted to directors, officers and controlling persons of
CardioDynamics pursuant to these provisions, or otherwise, we have been advised
that, in the opinion of the SEC, such indemnification is against public policy
as expressed in the Securities Act and is, therefore, unenforceable.

                                      -14-
<PAGE>

                    CARDIODYNAMICS INTERNATIONAL CORPORATION

                               TABLE OF CONTENTS

                                                                     Page
                                                                     ----

     WHERE YOU CAN FIND MORE INFORMATION..........................    2
     ABOUT CARDIODYNAMICS INTERNATIONAL CORPORATION...............    2
     RISK FACTORS.................................................    3
     FORWARD-LOOKING STATEMENTS...................................   11
     USE OF PROCEEDS..............................................   11
     SELLING SHAREHOLDERS.........................................   11
     PLAN OF DISTRIBUTION.........................................   12
     LEGAL MATTERS................................................   13
     EXPERTS......................................................   13
     INDEMNIFICATION..............................................   13
<PAGE>

                                    PART II

                     INFORMATION NOT REQUIRED IN PROSPECTUS

ITEM 14.  Other Expenses of Issuance and Distribution

     The following table sets forth the various costs and expenses we are paying
with respect to the sale and distribution of the securities being registered.
All of the amounts shown are estimates except the SEC registration fee.

     SEC Registration Fee....................................   $   255.68
     Printing Expenses *.....................................   $   500.00
     Expenses associated with complying with various states'
       registrations*........................................   $ 3,000.00
     Legal Fees and Expenses*................................   $ 3,000.00
     Nasdaq SmallCap Market Listing Fee*.....................   $ 3,261.08
     Accounting Fees and Expenses*...........................   $ 2,000.00
     Miscellaneous*..........................................   $ 1,983.24
           Total.............................................   $14,000.00
                                                                ==========
     ---------------
     *Estimated

ITEM 15.  INDEMNIFICATION OF DIRECTORS AND OFFICERS

     Section 317 of the California General Corporation Law allows companies to
indemnify their officers and directors against expenses, judgments, fines and
amounts paid in settlement under certain conditions and subject to certain
limitations.

     Article Three of our Bylaws provides that we shall indemnify any person who
is or was a director, officer, employee or agent of ours, or any person who is
or was serving at our request as a director, officer, employee or agent of
another corporation, subject to certain limitations.  In addition, expenses
incurred by a director, officer, employee or agent in defending a lawsuit by
reason of that person's relationship with us, may be paid by us in advance of
the final disposition of such lawsuit after we receive an undertaking by or on
behalf of such person to repay such amount if it shall ultimately be determined
that he or she is not entitled to be indemnified by us.

     Our Articles of Incorporation, as amended, provide that none of our
directors shall be liable for monetary damages in an action by or in
CardioDynamics' right for breach of a director's duties to us and our
shareholders, as set forth in Section 309 of the California Corporations Code.
However, such provision does not eliminate or limit the liability of a director:

     (i)    for acts or omissions that involve intentional misconduct or knowing
            or culpable violation of law;

     (ii)   for acts or omissions that a director believes to be contrary to our
            best interests or those of our shareholders or that involve the
            absence of good faith on the part of a director;

     (iii)  for any transaction from which a director derives an improper
            personal benefit;

     (iv)   for acts or omissions that show a reckless disregard of the
            director's duty in circumstances in which the director was aware, or
            should have been aware in the ordinary course of performing the
            director's duties, of a risk of serious injury to us or to our
            shareholders;

                                      II-1
<PAGE>

     (v)    for acts or omissions that constitute an unexecuted pattern of
            inattention that amounts to an abdication of the director's duty to
            us;

     (vi)   under Section 310 of the California Corporations Code; or

     (vii)  under Section 316 of the California Corporations Code;

Such provision eliminating liability does not eliminate or limit the liability
of an officer for any act or omission as an officer notwithstanding that the
officer is also a director or that his or her actions, if negligent or improper,
have been ratified by the directors.

     We are authorized to provide indemnification of our agents (as defined in
Section 317 of the California Corporations Code) for breach of duty to us and
our shareholders through bylaw provisions or through agreements with the agents,
or both, in excess of the indemnification otherwise permitted by Section 317 of
the California Corporations Code, subject to the limits on such excess
indemnification set forth in Section 204 of the California Corporations Code.
We have entered into such indemnification agreements with each of our directors
and officers.

     Insofar as indemnification for liabilities arising under the Securities Act
of 1933 may be permitted to directors, officers and controlling persons of
CardioDynamics pursuant to these provisions, or otherwise, we have been advised
that, in the opinion of the SEC, such indemnification is against public policy
as expressed in the Securities Act and is, therefore, unenforceable.

ITEM 16.  EXHIBITS

     EXHIBIT NUMBER

     5.1    Opinion of Pillsbury Madison & Sutro LLP.

     23.1   Consent of KPMG LLP, Independent Auditors.

     23.2   Consent of Pillsbury Madison & Sutro LLP (included in Exhibit 5.1).

     99.1   Letter Agreement between CardioDynamics and FIM Forte Fund dated
            June 17, 1999.

     99.2   Warrant to Purchase Stock dated June 17, 1999 issued to FIM Forte
            Fund with respect to 20,336 Shares of CardioDynamics Common Stock.

     99.3   Form of Letter Agreement between CardioDynamics and selling
            shareholders dated June 21, 1999.

ITEM 17.  UNDERTAKINGS

     We hereby undertake:

     (1)  To file, during any period in which we offer or sell securities, a
post-effective amendment to this registration statement to include any
additional or changed material information on the plan of distribution;

     (2)  That, for determining liability under the Securities Act, each such
post-effective amendment shall be treated as a new registration statement of the
securities offered, and the offering of the securities at that time shall be
treated as the initial bona fide offering; and

     (3)  To file a post-effective amendment to remove from registration any of
the securities that remain unsold at the end of the offering.

     Insofar as indemnification for liabilities arising under the Securities Act
of 1933 may be permitted to our directors, officers and controlling persons
pursuant to the foregoing provisions, or otherwise, we have been advised

                                      II-2
<PAGE>

that in the opinion of the SEC such indemnification is against public policy as
expressed in the Securities Act and is, therefore, unenforceable. In the event
that a claim for indemnification against such liabilities (other than the
payment by us of expenses incurred or paid by our director, officer, or
controlling person in the successful defense of any action, suit, or proceeding)
is asserted by such director, officer, or controlling person in connection with
the securities being registered, we will, unless in the opinion of our counsel
the question has been settled by controlling precedent, submit to a court of
appropriate jurisdiction the question whether such indemnification by us is
against public policy as expressed in the Securities Act and will be governed by
the final adjudication of such issue.

                                      II-3
<PAGE>

                                   SIGNATURES

     Pursuant to the requirements of the Securities Act of 1933, we certify that
we have reasonable grounds to believe that we meet all of the requirements for
filing on Form S-3 and have duly caused this Registration Statement to be signed
on our behalf by the undersigned, thereunto duly authorized, in the City of San
Diego, State of California, on the 1st day of October, 1999.

                              CARDIODYNAMICS INTERNATIONAL CORPORATION

                              By /s/  Michael K. Perry
                                 -----------------------------------------
                                 Michael K. Perry, Chief Executive Officer


                               POWER OF ATTORNEY

     Each person whose signature appears below constitutes and appoints Michael
K. Perry and Stephen P. Loomis, and each of them, as attorneys-in-fact, with the
power of substitution, for him in any and all capacities, to sign any amendment
to this Registration Statement and to file the same, with exhibits thereto and
other documents in connection therewith, with the SEC, granting to said
attorneys-in-fact full power and authority to do and perform each and every act
and thing requisite and necessary to be done in connection therewith, as fully
to all intents and purposes as he might or could do in person, hereby ratifying
and confirming all that said attorneys-in-fact or their substitute or
substitutes, may lawfully do or cause to be done by virtue hereof.

     Pursuant to the requirements of the Securities Act of 1933, this
Registration Statement has been signed below by the following persons in the
capacities and on the dates indicated.

<TABLE>
<CAPTION>
           Signature                                     Title                               Date
           ---------                                     -----                               ----
<S>                                      <C>                                           <C>
/s/  Michael K. Perry                     Director and Chief Executive Officer            September 26, 1999
- -----------------------------------          (Principal Executive Officer)
          Michael K. Perry

/s/  Stephen P. Loomis                    Vice President, Finance and Chief Financial     September 26, 1999
- -----------------------------------         Officer (Principal Financial Officer and
      Stephen P. Loomis                           Principal Accounting Officer)

/s/  Louis P. Ferrero                                      Director                       September 26, 1999
- -----------------------------------
       Louis P. Ferrero

/s/  Cam L. Garner                                         Director                       September 26, 1999
- -----------------------------------
         Cam L. Garner

/s/  James C. Gilstrap                                     Director                       September 26, 1999
- -----------------------------------
      James C. Gilstrap

/s/  Richard O. Martin                                     Director                       September 26, 1999
- -----------------------------------
       Richard O. Martin

/s/  Allen E. Paulson                                      Director                       September 26, 1999
- -----------------------------------
        Allen E. Paulson
</TABLE>

                                      II-4
<PAGE>

                       SECURITIES AND EXCHANGE COMMISSION

                            WASHINGTON, D.C.  20549

                                    EXHIBITS

                                       TO

                                    FORM S-3

                                     UNDER

                             SECURITIES ACT OF 1933

                    CARDIODYNAMICS INTERNATIONAL CORPORATION

                                      II-5
<PAGE>

                                 EXHIBIT INDEX
                                 -------------

Exhibit
Number       Exhibit
- -------      -------

5.1          Opinion of Pillsbury Madison & Sutro LLP.

23.1         Consent of KPMG LLP, Independent Auditors.

23.2         Consent of Pillsbury Madison & Sutro LLP (included in Exhibit 5.1).

99.1         Letter Agreement between CardioDynamics and FIM Forte Fund
             dated June 17, 1999.

99.2         Warrant to Purchase Stock dated June 17, 1999 issued to FIM Forte
             Fund with respect to 20,336 Shares of CardioDynamics Common Stock.

99.3         Form of Letter Agreement between CardioDynamics and selling
             shareholders dated June 21, 1999.

                                      II-6

<PAGE>

                                  EXHIBIT 5.1

                    OPINION OF PILLSBURY MADISON & SUTRO LLP

                                October 1, 1999

CardioDynamics International Corporation
6175 Nancy Ridge Drive
Suite 300
San Diego, California 92121

    Re:  CardioDynamics International Corporation Registration Statement on
         Form S-3 for Resale of 326,108 Shares of common stock

Ladies and Gentlemen:

    We have acted as counsel to CardioDynamics International Corporation, a
California corporation (the "Company"), in connection with the registration for
resale of 326,108 shares of common stock. Certain of the shares are issuable
upon the exercise of that certain Warrant to Purchase Stock (the "Warrant")
dated June 17, 1999 (the "Warrant Shares"). The Warrant and 305,772 of the
shares ( the "Shares") being registered were issued in connection with the
purchase of common stock issued upon conversion of outstanding Series A
Preferred Stock, as described in the Company's Registration Statement on
Form S-3 ("Registration Statement") filed with the Securities and Exchange
Commission under the Securities Act of 1933, as amended (the "Act").

    This opinion is being furnished in accordance with the requirements of Item
16 of Form S-3 and Item 601(b)(5)(i) of Regulation S-B.

    We have reviewed the Company's charter documents, the corporate proceedings
taken by the Company in connection with the original issuance of the Warrant and
the Shares, and a certificate of a Company officer regarding (among other
things) the Company's receipt of consideration upon the original issuance of the
Warrant and the Shares.  Based on such review, we are of the opinion that (i)
the Shares are duly authorized, validly issued, fully paid and nonassessable and
(ii) the Warrant Shares if, as and when issued upon the exercise of the Warrant
in accordance with the terms of the Warrant (including the payment of the
indicated purchase price), will be duly authorized, validly issued, fully paid
and nonassessable.

    We consent to the filing of this opinion as Exhibit 5.1 to the Registration
Statement and to the reference to this firm under the caption "Legal Matters" in
the prospectus which is part of the Registration Statement.  In giving this
consent, we do not thereby admit that we are within the category of persons
whose consent is required under Section 7 of the Act, the rules and regulations
of the Securities and Exchange Commission promulgated thereunder, or Item 509 of
Regulation S-B.

This opinion letter is rendered as of the date first written above and we
disclaim any obligation to advise you of facts, circumstances, events or
developments which hereafter may be brought to our attention and which may
alter, affect or modify the opinion expressed herein.  Our opinion is expressly
limited to the matters set forth above and we render no opinion, whether by
implication or otherwise, as to any other matters relating to the Company, the
Warrant or the Shares.

                                       Very truly yours,

                                       /s/ Pillsbury Madison & Sutro LLP


                                 EXHIBIT 5.1

<PAGE>

                                 EXHIBIT 23.1

                         INDEPENDENT AUDITORS' CONSENT

The Board of Directors
CardioDynamics International Corporation:

We consent to the use of our report incorporated herein by reference and to the
reference to our firm under the heading "Experts" in the prospectus.

                                       /s/ KPMG LLP

San Diego, California
September 30, 1999

<PAGE>

                                  EXHIBIT 99.1

            LETTER AGREEMENT WITH FIM FORTE FUND DATED JUNE 17, 1999


CardioDynamics
International Corporation

June 17, 1999

FACSIMILE 011 44 171 932 0100

Mr. Markku Kaloniemi
FIM Forte Fund

Dear Mr. Kaloniemi:

This letter confirms that in consideration of your purchase of 287,356 shares of
CardioDynamics International Corporation ("CardioDynamics") Common Stock at
$1.74 per share from the AGR Halifax Fund, Ltd. in a private transaction to be
completed no later than June 25, 1999, CardioDynamics will issue to FIM Forte
Fund, 20,336 common stock warrants priced at $1.625.  The warrants will have a
three-year term and CardioDynamics will endeavor to register the shares within
six months of the close of this transaction.

Very truly yours,
CARDIODYNAMICS INTERNATIONAL CORPORATION,


/s/ Michael K. Perry
Michael K. Perry
Chief Executive Officer

<PAGE>

                                  EXHIBIT 99.2

                           WARRANT TO PURCHASE STOCK

THIS WARRANT AND THE SHARES ISSUABLE HEREUNDER HAVE NOT BEEN REGISTERED UNDER
THE SECURITIES ACT OF 1933, AS AMENDED, AND MAY NOT BE SOLD, PLEDGED OR
OTHERWISE TRANSFERRED WITHOUT AN EFFECTIVE REGISTRATION THEREOF UNDER SUCH ACT
OR PURSUANT TO RULE 144 OR AN OPINION OF COUNSEL REASONABLY SATISFACTORY TO THE
CORPORATION AND ITS COUNSEL THAT SUCH REGISTRATION IS NOT REQUIRED.

                           WARRANT TO PURCHASE STOCK

Corporation:                 CardioDynamics International Corporation.
Number of Shares:            20,336
Class of Stock:              Common
Initial Exercise Price:      $ 1.625
Issue Date:                  June 17, 1999
Expiration Date:             June 17, 2002

     THIS WARRANT CERTIFIES THAT, in consideration of the payment of $1.00 and
for other good and valuable consideration, FIM FORTE FUND or registered assignee
("Holder") is entitled to purchase the number of fully paid and nonassessable
shares of the class of securities (the "Shares") of the corporation (the
"Company") at the initial exercise price per Share (the "Warrant Price") all as
set forth above and as adjusted pursuant to Article 2 of this Warrant, subject
to the provisions and upon the terms and conditions set forth of this Warrant.

ARTICLE 1  EXERCISE.
           --------

      1.1  Method of Exercise.  Holder may exercise this Warrant by delivering
           ------------------
this Warrant and a duly executed Notice of Exercise in substantially the form
attached as Appendix 1 to the principal office of the Company. Holder shall also
deliver to the Company a check for the aggregate Warrant Price for the Shares
being purchased.

      1.2  Fair Market Value.  If the Shares are traded regularly in a public
           -----------------
market, the fair market value of the Shares shall be the closing sale price of
the Shares (or the closing price of the Company's stock into which the Shares
are convertible) reported for the business day immediately before Holder
delivers its Notice of Exercise to the Company. If the Shares are not regularly
traded in a public market, the Board of Directors of the Company shall determine
fair market value in its reasonable good faith judgment. The foregoing
notwithstanding, if Holder advises the Board of Directors in writing that Holder
disagrees with such determination, then the Company and Holder shall promptly
agree upon a reputable investment banking firm to undertake such valuation. If
the valuation of such investment banking firm is greater than that determined by
the Board of Directors, then all fees and expenses of such investment banking
firm shall be paid by the Company. In all other circumstances, such fees and
expenses shall be paid by Holder.

      1.3  Delivery of Certificate and New Warrant.  Promptly after Holder
           ---------------------------------------
exercises or converts this Warrant, the Company shall deliver to Holder
certificates for the Shares acquired and, if this Warrant has not been fully
exercised or converted and has not expired, a new Warrant representing the
Shares not so acquired.

      1.4  Replacement of Warrants.  On receipt of evidence reasonably
satisfactory to the Company of the loss, theft, destruction or mutilation of
this Warrant and, in the case of loss, theft or destruction, on delivery of an
                                                                         -----
indemnity agreement reasonably satisfactory in form and amount to the Company
- -----------------------------------------------------------------------------
or, in the case of mutilation, on surrender and cancellation of this Warrant,
- ---------------
the Company at its expense shall execute and deliver, in lieu of this Warrant, a
new warrant of like tenor.
<PAGE>

      1.5  Repurchase on Sale, Merger, or Consolidation of the Company.
           -----------------------------------------------------------

           1.5.1  "Acquisition".  For the purpose of this Warrant, "Acquisition"
                  -------------
means any sale, license, or other disposition of all or substantially all of the
assets (including intellectual property) of the Company, or any reorganization,
consolidation, or merger of the Company where the holders of the Company's
securities before the transaction beneficially own less than 50% of the
outstanding voting securities of the surviving entity after the transaction.

           1.5.2  Assumption of Warrant.  If upon the closing of any Acquisition
                  ---------------------
the successor entity assumes the obligations of this Warrant, then this Warrant
shall be exercisable for the same securities, cash, and property as would be
payable for the Shares issuable upon exercise of the unexercised portion of this
Warrant as if such Shares were outstanding on the record date for the
Acquisition and subsequent closing. The Warrant Price shall be adjusted
accordingly. The Company shall use reasonable efforts to cause the surviving
corporation to assume the obligations of this Warrant.

           1.5.3  Nonassumption.  If upon the closing of any Acquisition the
                  -------------
successor entity does not assume the obligations of this Warrant and Holder has
not otherwise exercised this Warrant in full, then the unexercised portion of
this Warrant shall be deemed to have been automatically converted and thereafter
Holder shall participate in the Acquisition on the same terms as other holders
of the same class of securities of the Company.

           1.5.4  Purchase Right.  Notwithstanding the foregoing, at the
                  --------------
election of Holder, the Company shall purchase the unexercised portion of this
Warrant for cash upon the closing of any Acquisition for an amount equal to (a)
the fair market value of any consideration that would have been received by
Holder in consideration of the Shares had Holder exercised the unexercised
portion of this Warrant immediately before the record date for determining the
shareholders entitled to participate in the proceeds of the Acquisition, less
(b) the aggregate Warrant Price of the Shares, but in no event less than zero.

ARTICLE 2  ADJUSTMENTS TO THE SHARES.
           -------------------------

      2.1  Stock Dividends, Splits, Etc.  If the Company declares or pays a
           -----------------------------
dividend on its common stock payable in common stock, or other securities, or
subdivides the outstanding common stock into a greater amount of common stock,
then upon exercise of this Warrant, for each Share acquired, Holder shall
receive, without cost to Holder, the total number and kind of securities to
which Holder would have been entitled had Holder owned the Shares of record as
of the date the dividend or subdivision occurred.

      2.2  Reclassification, Exchange or Substitution.  Upon any
           ------------------------------------------
reclassification, exchange, substitution, or other event that results in a
change of the number and/or class of the securities issuable upon exercise or
conversion of this Warrant, Holder shall be entitled to receive, upon exercise
or conversion of this Warrant, the number and kind of securities and property
that Holder would have received for the Shares if this Warrant had been
exercised immediately before such reclassification, exchange, substitution, or
other event. Such an event shall include any automatic conversion of the
outstanding or issuable securities of the Company of the same class or series as
the Shares to common stock pursuant to the terms of the Company's Articles of
Incorporation upon the closing of a registered public offering of the Company's
common stock. The Company or its successor shall promptly issue to Holder a new
Warrant for such new securities or other property. The new Warrant shall provide
for adjustments which shall be as nearly equivalent as may be practicable to the
adjustments provided for in this Article 2 including, without limitation,
adjustments to the Warrant Price and to the number of securities or property
issuable upon exercise of the new Warrant. The provisions of this Section 2.2
shall similarly apply to successive reclassifications, exchanges, substitutions,
or other events.

      2.3  Adjustments for Combinations, Etc.  If the outstanding Shares are
           ----------------------------------
combined or consolidated, by reclassification or otherwise, into a lesser number
of shares, the Warrant Price shall be proportionately increased.

      2.4  No Impairment.  The Company shall not, by amendment of its Articles
           -------------
of Incorporation or through a reorganization, transfer of assets, consolidation,
merger, dissolution, issue, or sale of securities or any other voluntary action,
avoid or seek to avoid the observance or performance of any of the terms to be
observed or performed under this Warrant by the Company, but shall at all times
in good faith assist in carrying out all the provisions of this Article 2 and in
taking all such action as may be necessary or appropriate to protect Holder's
rights
<PAGE>

under this Article against impairment. If the Company takes any action affecting
the Shares or its common stock other than as described above that adversely
affects Holder's rights under this Warrant, the Warrant Price shall be adjusted
downward and the number of Shares issuable upon exercise of this Warrant shall
be adjusted upward in such a manner that the aggregate Warrant Price of this
Warrant is unchanged.

ARTICLE 3  REPRESENTATIONS AND COVENANTS OF THE COMPANY.
           --------------------------------------------

      3.1  Representations and Warranties.  The Company hereby represents and
           ------------------------------
warrants to the Holder as follows:

           All Shares which may be issued upon the exercise of the purchase
right represented by this Warrant, and all securities, if any, issuable upon
conversion of the Shares, shall, upon issuance, be duly authorized, validly
issued, fully paid and nonassessable, and free of any liens and encumbrances
except for restrictions on transfer provided for herein or under applicable
federal and state securities laws.

      3.2  Notice of Certain Events.  If the Company proposes at any time (a) to
           ------------------------
declare any dividend or distribution upon its common stock, whether in cash,
property, stock, or other securities and whether or not a regular cash dividend;
(b) to offer for subscription pro rata to the holders of any class or series of
its stock any additional shares of stock of any class or series or other rights;
(c) to effect any reclassification or recapitalization of common stock; (d) to
merge or consolidate with or into any other corporation, or sell, lease,
license, or convey all or substantially all of its assets, or to liquidate,
dissolve or wind up; then, in connection with each such event, the Company shall
give Holder (1) written notice of the date on which a record will be taken for
such dividend, distribution, or subscription rights (and specifying the date on
which the holders of common stock will be entitled thereto) or for determining
rights to vote, if any, in respect of the matters referred to in (c) and (d)
above; (2) in the case of the matters referred to in (c) and (d) above at least
15 days prior written notice of the date when the same will take place (and
specifying the date on which the holders of common stock will be entitled to
exchange their common stock for securities or other property deliverable upon
the occurrence of such event.

      3.3  Information Rights.  So long as the Holder holds this Warrant and/or
           ------------------
any of the Shares, the Company shall deliver to the Holder (a) promptly after
mailing, copies of all communiques to the shareholders of the Company, (b)
within ninety (90) days after the end of each fiscal year of the Company, the
annual audited financial statements of the Company certified by independent
public accountants of recognized standing and (c) within forty-five (45) days
after the end of each of the first three quarters of each fiscal year, the
Company's quarterly, unaudited financial statements.

ARTICLE 4  MISCELLANEOUS.
           -------------

      4.1  Term: Notice of Expiration.  This Warrant is exercisable, in whole or
           --------------------------
in part, at any time and from time to time on or before the Expiration Date set
forth above.

      4.2  Legends.  This Warrant and the Shares (and the securities issuable,
           -------
directly or indirectly, upon exercise or conversion of the Shares, if any) shall
be imprinted with a legend in substantially the following form:

      THIS SECURITY HAS NOT BEEN REGISTERED UNDER THE SECURITIES ACT OF 1933, AS
      AMENDED, AND MAY NOT BE SOLD, PLEDGED OR OTHERWISE TRANSFERRED WITHOUT AN
      EFFECTIVE REGISTRATION THEREOF UNDER SUCH ACT OR PURSUANT TO RULE 144 OR
      AN OPINION OF COUNSEL REASONABLY SATISFACTORY TO THE CORPORATION AND ITS
      COUNSEL THAT SUCH REGISTRATION IS NOT REQUIRED.

      4.3  Compliance with Securities Laws on Transfer.  This Warrant and the
           -------------------------------------------
Shares issuable upon exercise this Warrant (and the securities issuable,
directly or indirectly, upon exercise or conversion of the Shares, if any) may
not be transferred or assigned in whole or in part without compliance with
applicable federal and state securities laws by the transferor and the
transferee (including, without limitation, the delivery of investment
representation letters and legal opinions reasonably satisfactory to the
Company). The Company shall not require Holder to provide an opinion of counsel
if the transfer is to an affiliate of Holder or if there is no material question
as to the availability of current information as referenced in Rule 144(c),
Holder represents that it has complied with Rule 144(d) and (e) in reasonable
detail, the selling broker represents that it has complied with Rule 144(f), and
the Company is provided with a copy of Holder's notice of proposed sale.
<PAGE>

      4.4  Transfer Procedure.  Subject to the provisions of Section 4.3, Holder
           ------------------
may transfer all or part of this Warrant or the Shares issuable upon exercise of
this Warrant (or the securities issuable, directly or indirectly, upon exercise
or conversion of the Shares, if any) by giving the Company notice of the portion
of the Warrant being transferred setting forth the name, address and taxpayer
identification number of the transferee and surrendering this Warrant to the
Company for reissuance to the transferee(s) (and Holder, if applicable). Unless
the Company is filing financial information with the SEC pursuant to the
Securities Exchange Act of 1934, the Company shall have the right to refuse to
transfer any portion of this Warrant to any person who directly competes with
the Company.

      4.5  Notices.  All notices and other communications from the Company to
           -------
the Holder, or vice versa, shall be deemed delivered and effective when given
personally or mailed by first-class registered or certified mail, postage
prepaid, at such address as may have been furnished to the Company or the
Holder, as the case may be, in writing by the Company or such Holder from time
to time.

      4.6  Waiver.  This Warrant and any term hereof may be changed, waived,
           ------
discharged or terminated only by an instrument in writing signed by the party
against which enforcement of such change, waiver, discharge or termination is
sought.

      4.7  Attorneys' Fees.  In the event of any dispute between the parties
           ---------------
concerning the terms and provisions of this Warrant, the party prevailing in
such dispute shall be entitled to collect from the other party all costs
incurred in such dispute, including reasonable attorneys' fees.

      4.8  Governing Law.  This Warrant shall be governed by and construed in
           -------------
accordance with the laws of the State of California, without giving effect to
its principles regarding conflicts of law.


                              CARDIODYNAMICS INTERNATIONAL CORPORATION

                              By:
                                  ----------------------------------------

                              Name:
                                    --------------------------------------

                              Title:
                                     -------------------------------------
<PAGE>

                                   APPENDIX 1

                               NOTICE OF EXERCISE
                               ------------------

    1.  The undersigned hereby elects to purchase __________ shares of the
Common Stock of CardioDynamics International Corporation pursuant to the terms
of the attached Warrant, and tenders herewith payment of the purchase price of
such shares in full.

    2.  Please issue a certificate or certificates representing said shares in
the name of the undersigned or in such other name as is specified below:

               FIM Forte Fund

    3.  The undersigned represents it is acquiring the shares solely for its own
account and not as a nominee for any other party and not with a view toward the
resale or distribution thereof except in compliance with applicable securities
laws.

FIM FORTE FUND



______________________________________
(Signature)

______________________________________
(Date)

<PAGE>

                                  EXHIBIT 99.3

      FORM LETTER AGREEMENT WITH SELLING SHAREHOLDERS DATED JUNE 21, 1999


CardioDynamics
International Corporation

June 21, 1999

FACSIMILE
         ---------------------

- ----------------------------------

- ----------------------------------

- ----------------------------------

Dear                    :
    --------------------

This letter confirms that in consideration of your purchase of ___________
shares of CardioDynamics International Corporation ("CardioDynamics") Common
Stock with the following Preferred shareholders at $1.68 per share in a private
transaction to be completed no later than June 23, 1999, CardioDynamics will
issue to _____________, ____________ shares of CardioDynamics Common Stock at no
cost:

Fund                           Shares             Consideration
- -----------------------------------------------------------------

- -------------------      ------------------      ----------------

- -------------------      ------------------      ----------------

- -------------------      ------------------      ----------------

- -------------------      ------------------      ----------------

- -------------------      ------------------      ----------------

    For a total of                              $
                         ------------------      ----------------


CardioDynamics will endeavor to register the shares within six months of the
close of this transaction.

Very truly yours,
CARDIODYNAMICS INTERNATIONAL CORPORATION,


/s/ Michael K. Perry
Michael K. Perry
Chief Executive Officer


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