ADVANCED MAGNETICS INC
SC 13D/A, 1998-03-30
IN VITRO & IN VIVO DIAGNOSTIC SUBSTANCES
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<PAGE>

                          SECURITIES AND EXCHANGE COMMISSION
                                WASHINGTON, DC  20549

                                    --------------

                                     SCHEDULE 13D
                                    (RULE 13d-101)

                      UNDER THE SECURITIES EXCHANGE ACT OF 1934
                                 (AMENDMENT NO. 3)(1)


                               ADVANCED MAGNETICS, INC.
                               ------------------------
                                   (Name of Issuer)

                                     Common Stock
                                     ------------
                            (Title of Class of Securities)

                                     00753 P 103
                                     -----------
                                    (CUSIP Number)

                                      Hope Flack
                                  BVF Partners L.P.
                          333 West Wacker Drive, Suite 1600
                               Chicago, Illinois  60606
                                    (312) 263-7777
                       ----------------------------------------
                    (Name, Address and Telephone Number of Person
                  Authorized to Receive Notices and Communications)

                                    March 19, 1998
                                    --------------
               (Date of Event which Requires Filing of this Statement)

     If the filing person has previously filed a statement on Schedule 13G to
report the acquisition which is the subject of this Schedule 13D, and is filing
this schedule because of Rule 13d-1(b)(3) or (4), check the following box / /.

          NOTE: Six copies of this statement, including all exhibits, should be
     filed with the Commission.  SEE Rule 13d-1(a) for other parties to whom
     copies are to be sent.

                            (Continued on following pages)

                                 (Page 1 of 7 Pages)

- ----------------

(1)  The remainder of this cover page shall be filled out for a reporting
person's initial filing on this form with respect to the subject class of
securities, and for any subsequent amendment containing information which would
alter disclosures provided in a prior cover page.

     The information required on the remainder of this cover page shall not be
deemed to be "filed" for the purpose of Section 18 of the Securities Exchange
Act of 1934 or otherwise subject to the liabilities of that section of the Act
but shall be subject to all other provisions of the Act (however, SEE the
NOTES).

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  2  of  7   Pages
          -----------                                          ---    --- 


- -------------------------------------------------------------------------------
 (1) Names of Reporting Persons.  S.S. or I.R.S. Identification Nos. of Above
     Persons

          BIOTECHNOLOGY VALUE FUND, L.P.
- -------------------------------------------------------------------------------
 (2) Check the Appropriate Box if a Member     (a)  /X/
     of a Group*                               (b)  / /
- -------------------------------------------------------------------------------
 (3) SEC Use Only

- -------------------------------------------------------------------------------
 (4) Source of Funds*
         WC
- -------------------------------------------------------------------------------
 (5) Check if Disclosure of Legal Proceedings is Required Pursuant to
     Items 2(d) or 2(e)
- -------------------------------------------------------------------------------
 (6) Citizenship or Place of Organization
         DELAWARE
- -------------------------------------------------------------------------------
Number of Shares              (7) Sole Voting
 Beneficially Owned                 Power        -0-
 by Each Reporting           --------------------------------------------------
 Person With                  (8) Shared Voting
                                    Power        353,600
                             --------------------------------------------------
                              (9) Sole Dispositive
                                    Power        -0-
                             --------------------------------------------------
                             (10) Shared Dispositive
                                    Power        353,600
- -------------------------------------------------------------------------------
(11) Aggregate Amount Beneficially Owned by Each Reporting Person
           353,600
- -------------------------------------------------------------------------------
(12) Check if the Aggregate Amount in Row (11) Excludes Certain Shares*

- -------------------------------------------------------------------------------
(13) Percent of Class Represented by Amount in Row (11)
           5.3%
- -------------------------------------------------------------------------------
(14) Type of Reporting Person*
           PN
- -------------------------------------------------------------------------------

                        * SEE INSTRUCTIONS BEFORE FILLING OUT!

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  3  of  7  Pages
          -----------                                          ---    --- 


- -------------------------------------------------------------------------------
 (1) Names of Reporting Persons.  S.S. or I.R.S. Identification Nos. of Above
     Persons

           BVF PARTNERS L.P.
- -------------------------------------------------------------------------------
 (2) Check the Appropriate Box if a Member     (a)  /X/
     of a Group*                               (b)  / /
- -------------------------------------------------------------------------------
 (3) SEC Use Only

- -------------------------------------------------------------------------------
 (4) Source of Funds*
          OO
- -------------------------------------------------------------------------------
 (5) Check if Disclosure of Legal Proceedings is Required Pursuant to
     Items 2(d) or 2(e)
- -------------------------------------------------------------------------------
 (6) Citizenship or Place of Organization
          DELAWARE
- -------------------------------------------------------------------------------
Number of Shares              (7) Sole Voting
 Beneficially Owned                 Power       -0-
 by Each Reporting           --------------------------------------------------
 Person With                  (8) Shared Voting
                                    Power       723,635
                             --------------------------------------------------
                              (9) Sole Dispositive
                                    Power       -0-
                             --------------------------------------------------
                             (10) Shared Dispositive
                                    Power       723,635
- -------------------------------------------------------------------------------
(11) Aggregate Amount Beneficially Owned by Each Reporting Person
           723,635
- -------------------------------------------------------------------------------
(12) Check if the Aggregate Amount in Row (11) Excludes Certain Shares*

- -------------------------------------------------------------------------------
(13) Percent of Class Represented by Amount in Row (11)
           10.8%
- -------------------------------------------------------------------------------
(14) Type of Reporting Person*
           PN
- -------------------------------------------------------------------------------

                        * SEE INSTRUCTIONS BEFORE FILLING OUT!

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  4  of  7  Pages
          -----------                                          ---    --- 


- -------------------------------------------------------------------------------
 (1) Names of Reporting Persons.  S.S. or I.R.S. Identification Nos. of Above
     Persons

           BVF INC.
- -------------------------------------------------------------------------------
 (2) Check the Appropriate Box if a Member     (a)  /X/
     of a Group*                               (b)  / /
- -------------------------------------------------------------------------------
 (3) SEC Use Only

- -------------------------------------------------------------------------------
 (4) Source of Funds*
          WC, OO
- -------------------------------------------------------------------------------
 (5) Check if Disclosure of Legal Proceedings is Required Pursuant to
     Items 2(d) or 2(e)
- -------------------------------------------------------------------------------
 (6) Citizenship or Place of Organization
          DELAWARE
- -------------------------------------------------------------------------------
Number of Shares              (7) Sole Voting
 Beneficially Owned                 Power       -0-
 by Each Reporting           --------------------------------------------------
 Person With                  (8) Shared Voting
                                    Power       723,635
                             --------------------------------------------------
                              (9) Sole Dispositive
                                    Power       -0-
                             --------------------------------------------------
                             (10) Shared Dispositive
                                    Power       723,635
- -------------------------------------------------------------------------------
(11) Aggregate Amount Beneficially Owned by Each Reporting Person
           723,635
- -------------------------------------------------------------------------------
(12) Check if the Aggregate Amount in Row (11) Excludes Certain Shares*

- -------------------------------------------------------------------------------
(13) Percent of Class Represented by Amount in Row (11)
           10.8%
- -------------------------------------------------------------------------------
(14) Type of Reporting Person*
           IA, CO
- -------------------------------------------------------------------------------

                        * SEE INSTRUCTIONS BEFORE FILLING OUT!

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  5  of  7  Pages
          -----------                                          ---    --- 

     This Amendment No. 3 (this "Amendment") relates to the Statement on 
Schedule 13D, dated October 30, 1996, as amended by Amendment No. 2, dated 
December 24, 1997, and Amendment No. 1, dated April 18, 1997 (as so amended, 
the "Statement"), filed with the Securities and Exchange Commission on behalf 
of Biotechnology Value Fund, L.P., a Delaware limited partnership ("BVF"), 
BVF Partners L.P., a Delaware limited partnership ("Partners"), and BVF Inc., 
a Delaware corporation ("BVF Inc." and, together with BVF and Partners, the 
"Reporting Persons") with respect to the Common Stock, par value $0.01 per 
share (the "Stock"), of Advanced Magnetics, Inc. ("Advanced Magnetics").  The 
principal executive office of Advanced Magnetics is located at 725 Concord 
Ave, Cambridge, MA  02138.

     Item 3 is hereby amended to read in its entirety as follows:

ITEM 3.   SOURCE AND AMOUNT OF FUNDS OR OTHER CONSIDERATION.

     Since January 17, 1998, Partners, in its capacity as general partner of 
BVF, has purchased on behalf of such limited partnership an aggregate number 
of 17,200 shares of the Stock for an aggregate consideration of $225,193.25, 
utilizing funds provided by BVF from its working capital pursuant to the 
terms of its limited partnership agreement with Partners.  In addition, 
Partners, in its capacity as investment manager with respect to certain 
managed accounts, has purchased on behalf of such managed accounts an 
aggregate number of 37,700 shares of the Stock for an aggregate consideration 
of $483,645.91, utilizing funds under management by Partners pursuant to an 
investment management agreement between Partners and such managed accounts.


     Item 5 is hereby amended to read in its entirety as follows:

ITEM 5.   INTEREST IN SECURITIES OF THE ISSUER.

     (a)  BVF beneficially owns 353,600 shares of the Stock, Partners
beneficially owns 723,635 shares of the Stock, and BVF Inc. beneficially owns
723,635 shares of the Stock, approximately 5.3%, 10.8% and 10.8%, respectively,
of the aggregate number of shares outstanding (as reported in Advanced Magnetics
most recent quarterly statement on Form 10-Q).

     (b)   BVF shares voting and dispositive power over the 353,600 shares of
the Stock it beneficially owns with Partners.  Partners and BVF Inc. share
voting and dispositive power over the 723,635 shares of the Stock they
beneficially own with, in addition to BVF, the managed accounts on whose behalf
Partners, as investment manager, purchased such shares.  The managed accounts on
whose behalf Partners owns shares of the Stock are Investment 10 L.L.C., an
Illinois limited liability company ("ILL10"), Palamundo, L.D.C., a limited

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  6  of  7  Pages
          -----------                                          ---    --- 

duration company organized under the laws of the Cayman Islands 
("Palamundo"), ZPG Securities, L.L.C., a New York limited liability company 
("ZPG") and Biotechnology Value Fund, Ltd., a Cayman Islands Corporation 
("BVF Ltd.").  ILL10, Palamundo, ZPG and BVF Ltd. are collectively referred 
to herein as the "Accounts."  The Accounts specialize in holding 
biotechnology stocks for investment purposes and the business address of each 
is BVF Partners L.P., 333 West Wacker Drive, Suite 1600, Chicago, Illinois 
60606.

     (c)  Exhibit B attached hereto contains information as to all transactions
in the Stock by the Reporting Persons during the past 60 days.  All such
transactions were made for cash in open market, over-the-counter transactions. 
No other transactions in the Stock have been effected by the Reporting Persons
during the past 60 days.

     (d)  The Accounts are entitled to receive dividends and any sale proceeds
with respect to the Stock in proportion to their respective ownership interests
therein.

     Item 7 is hereby amended to read in its entirety as follows:

ITEM 7.   MATERIAL TO BE FILED AS EXHIBITS.

     Exhibit A - Agreement Regarding Joint Filing

     Exhibit B - Transactions in the Stock by the Reporting Persons during the
last 60 days.

<PAGE>

CUSIP No. 00753 P 103                 13D                 Page  7  of  7  Pages
          -----------                                          ---    --- 

     After reasonable inquiry and to the best of my knowledge and belief, I
certify that the information set forth in this statement is true, complete and
correct.

Dated:  March 30, 1998

     BIOTECHNOLOGY VALUE FUND, L.P.

     By:  BVF Partners L.P., its general partner

          By:  BVF Inc., its general partner


               By: /s/ Mark N. Lampert
                  ------------------------------------
                    Mark N. Lampert
                    President

     BVF PARTNERS L.P.

     By:  BVF Inc., its general partner


          By: /s/ Mark N. Lampert
             ------------------------------------
               Mark N. Lampert
               President

     BVF INC.


     By: /s/ Mark N. Lampert
        -----------------------------------
          Mark N. Lampert
          President

<PAGE>

                                   EXHIBIT A

                        AGREEMENT REGARDING JOINT FILING


     The undersigned, Biotechnology Value Fund, L.P., a Delaware limited
partnership, and BVF Partners L.P., a Delaware limited partnership, and BVF
Inc., a Delaware corporation, hereby agree and acknowledge that the Amendment
containing the information required by Schedule 13D, to which this Agreement is
attached as an exhibit, is filed on behalf of each of them.  The undersigned
further agree that any further amendments or supplements thereto shall also be
filed on behalf of each of them.

Dated:  March 30, 1998

     BIOTECHNOLOGY VALUE FUND, L.P.

     By:  BVF Partners L.P., its general partner

          By:  BVF Inc., its general partner


               By: /s/ Mark N. Lampert
                  -----------------------------------
                    Mark N. Lampert
                    President

     BVF PARTNERS L.P.

     By:  BVF Inc., its general partner


          By: /s/ Mark N. Lampert
             ---------------------------------
               Mark N. Lampert
               President

     BVF INC.


     By: /s/ Mark N. Lampert
        ---------------------------------
          Mark N. Lampert
          President

<PAGE>

                                   EXHIBIT B

               TRANSACTIONS IN THE STOCK BY THE REPORTING PERSONS
                            DURING THE LAST 60 DAYS

<TABLE>
<CAPTION>

- -------------------------------------------------------------------------------------------------
  SETTLEMENT                   FOR THE                        PRICE PER     TYPE OF
     DATE         BY         ACCOUNT OF       QUANTITY         SHARE         TRADE      BROKER
- -------------------------------------------------------------------------------------------------
  <S>          <C>           <C>              <C>             <C>          <C>          <C>
   01/30/98    Partners       BVF Ltd.          3,000          $9.9688     Purchase      DAKN
- -------------------------------------------------------------------------------------------------
   03/06/98    Partners       BVF Ltd.          9,600         $12.9830     Purchase      DAKN
- -------------------------------------------------------------------------------------------------
   03/09/98    Partners       BVF               5,000         $12.9873     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/09/98    Partners       ILL10               900         $12.9873     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/09/98    Partners       PAL                 600         $12.9873     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/09/98    Partners       ZPG                 500         $12.9873     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/09/98    Partners       BVF Ltd.          3,000         $12.9873     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/11/98    Partners       BVF Ltd.         11,300         $13.0000     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/13/98    Partners       BVF               7,200         $13.0000     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/13/98    Partners       BVF Ltd.          2,000         $13.0000     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/16/98    Partners       BVF Ltd.          1,800         $12.9720     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/19/98    Partners       BVF               5,000         $13.1250     Purchase      HJCO
- -------------------------------------------------------------------------------------------------
   03/19/98    Partners       BVF Ltd.          5,000         $13.1250     Purchase      HJCO
- -------------------------------------------------------------------------------------------------

</TABLE>

     DAKN   =    Dakin Securities
     HJCO   =    H.J. Meyers




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