TRIPOS INC
DEF 14A, 2000-04-07
PREPACKAGED SOFTWARE
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                      SCHEDULE 14A INFORMATION

          Proxy Statement Pursuant to Section 14(a) of the
                   Securities Exchange Act of 1934

Filed by the Registrant [X]
Filed by a Party other than the Registrant [  ]

Check the appropriate box:

[ ]   Preliminary Proxy Statement
[ ]   Confidential, for Use of the Commission Only (as permitted by
      Rule 14a-6(e)(2))
[X]   Definitive Proxy Statement
[ ]   Definitive Additional Materials
[ ]   Soliciting Material Pursuant to Sec. 240.14a-11(c) or Sec.
      240.14a-12

                            TRIPOS, INC.
          (Name of Registrant as Specified In Its Charter)


(Name of Person(s) Filing Proxy Statement if other than the Registrant)

Payment of Filing Fee (Check the appropriate box):

[X]     No fee required.
[ ]     Fee computed on table below per Exchange Act Rules
        14a-6(i)(1) and 0-11.

        1)  Title of each class of securities to which transaction applies:

        2)  Aggregate number of securities to which transaction applies:

        3) Per unit price or other underlying value of transaction
           computed pursuant to Exchange Act Rule 0-11 (Set forth the
           amount on which the filing fee is calculated and state how it
           was determined):

        4) Proposed maximum aggregate value of transaction:

        5) Total fee paid:

[ ]     Fee paid previously with preliminary materials.

[ ]     Check box if any part of the fee is offset as provided by
Exchange Act Rule 0-11(a)(2) and identify the filing for which the
offsetting fee was paid previously.  Identify the previous filing by
registration statement number, or the Form or Schedule and the date
of its filing.

          1)  Amount Previously Paid:

          2)  Form, Schedule or Registration Statement No.:

          3)  Filing Party:

          4)  Date Filed:




                       Company's Triangle Logo
                            TRIPOS, INC.


              NOTICE OF ANNUAL MEETING OF SHAREHOLDERS
                       To be held May 11, 2000

To Our Shareholders:

      The  Annual  Meeting  of Shareholders  of  Tripos,  Inc.  (the
"Company") will be held at the World Trade Center St. Louis, 121  S.
Meramec, 10th Floor, Clayton, Missouri 63105 at 1:00 p.m. local time
on May 11, 2000 for the following purposes:

     1.   To elect directors to serve for the ensuing year or until their
       successors are elected; and

     2.   To act upon such other business as may properly come before the
       Annual Meeting or at any adjournments or postponements thereof.

     The Board of Directors has fixed the close of business on April 4,
2000  as the record date for determining those shareholders  who
will be entitled to notice of and to vote at the Annual Meeting.

     Representation of at least a majority of all outstanding shares
of  Common Stock of the Company is required to constitute a  quorum.
Accordingly, it is important that your shares be represented at  the
meeting.   WHETHER  OR  NOT YOU PLAN TO ATTEND THE  ANNUAL  MEETING,
PLEASE COMPLETE, DATE AND SIGN THE ENCLOSED PROXY FORM AND RETURN IT
IN  THE  ENCLOSED ENVELOPE.  You may revoke your proxy at  any  time
prior to the time it is voted.  If you attend the Annual Meeting and
vote  by  ballot, your proxy will be revoked automatically and  only
your vote at the Annual Meeting will be counted.

                                             Sincerely,



                                             Colleen A. Martin
                                             Corporate Secretary

St. Louis, Missouri
April 7, 2000





         Shareholders Should Read the Entire Proxy Statement
           Carefully Prior to Returning Their Proxy Forms

                           PROXY STATEMENT
                                 FOR
                  ANNUAL MEETING OF SHAREHOLDERS OF
                            TRIPOS, INC.

                       To be held May 11, 2000

      This  Proxy Statement is furnished to shareholders of  Tripos,
Inc.  ("Tripos" or the "Company"), a Utah corporation, in connection
with  the solicitation by the Board of Directors of proxies for  use
at  the Annual Meeting of Shareholders to be held at 1:00 p.m. local
time  on  May 11, 2000 at the World Trade Center St. Louis,  121  S.
Meramec, 10th Floor, Clayton, Missouri 63105, or at any adjournments
or  postponements  thereof,  for  the  purposes  set  forth  in  the
accompanying Notice of Annual Meeting of Shareholders.   This  Proxy
Statement and the accompanying proxy form are first being mailed  to
shareholders on or about April 7, 2000.

                   VOTING RIGHTS AND SOLICITATION

      The close of business on April 4, 2000 was the record date for
shareholders  entitled  to  notice of and  to  vote  at  the  Annual
Meeting.   As  of that date, Tripos had 3,487,852 shares  of  Common
Stock,  $.01  par value per share (the "Common Stock"),  issued  and
outstanding.   All  of  the  shares of the  Company's  Common  Stock
outstanding  on the record date are entitled to vote at  the  Annual
Meeting, and shareholders of record entitled to vote at the  meeting
will  have one (1) vote for each share so held on the matters to  be
voted upon.

      Shares of the Company's Common Stock represented by proxies in
the  accompanying form that are properly executed  and  returned  to
Tripos  will  be  voted  at the Annual Meeting  of  Shareholders  in
accordance  with  the shareholders' instructions contained  therein.
In  the absence of contrary instructions, shares represented by such
proxies  will be voted FOR the election of each of the directors  as
described  herein  under  "Proposal 1  --  Election  of  Directors".
Management  does  not know of any matters to be  presented  in  this
Annual  Meeting  other than those set forth in this Proxy  Statement
and  in  the  Notice  accompanying this Proxy Statement.   If  other
matters  should properly come before the meeting, the proxy  holders
will vote on such matters in accordance with their best judgement.

     Any shareholder has the right to revoke his or her proxy at any
time  before it is voted.  A proxy may be revoked either by  written
notice  to the Secretary of the Company or by attending the  meeting
and voting in person.

     A  majority of the outstanding shares of Common Stock,  present
in  person or represented by proxy, will constitute a quorum for the
transaction  of business at the Annual Meeting.  Shares  represented
by  proxies which are marked to "withhold authority" with respect to
the  election  of  any one or more of the nominees for  election  of
directors and proxies which are marked to "abstain" with respect  to
any  other matter will be counted for the purpose of determining the
number  of  shares  represented by proxy  at  the  meeting  and  the
presence or absence of a quorum.

     The  affirmative vote of a plurality of the shares present,  in
person  or  by  proxy, at the Annual Meeting, is required  to  elect
directors.   "Plurality"  means that the nominees  who  receive  the
largest  number  of  votes  cast,  up  to  the  maximum  number   of
directorships to be filled, will be elected.  Consequently,  marking
the proxy statement to withhold a vote for one or more nominees does
not  have  the effect of a vote against that director(s),  but  will
have an effect on the number of votes cast in the election and could
effect the outcome.

     If no specification is made on a duly executed proxy, the proxy
will  be voted FOR election of the directors nominated by the  Board
of Directors.  Abstentions and broker non-votes are each included in
the  determination  of  the  number of  shares  present  for  quorum
purposes.  Abstentions are counted in tabulations of the votes  cast
on proposals presented to shareholders, whereas broker non-votes are
not  counted for purposes of determining whether a proposal has been
approved.

      The entire cost of soliciting proxies will be borne by Tripos.
Proxies will be solicited principally through the use of the  mails,
but,  if  deemed  desirable,  may  be  solicited  personally  or  by
telephone, telefax or special letter by officers and regular  Tripos
employees for no additional compensation.  The Board of Directors of
the  Company has engaged ChaseMellon Shareholder Services to provide
routine  advice  and  services.  Arrangements have  been  made  with
brokerage  houses and other custodians, nominees and fiduciaries  to
send  proxies  and proxy materials to the beneficial owners  of  the
Company's  Common  Stock, and such persons shall be  reimbursed  for
their reasonable expenses.

                        SHAREHOLDER PROPOSALS

      Proposals of Shareholders intended to be presented at the 2001
Annual  Meeting  must  be  received by the  Company  no  later  than
December  12,  2000, for inclusion in the Company's proxy  statement
and  proxy  relating  to that meeting.  Upon  receipt  of  any  such
proposal, the Company will determine whether or not to include  such
proposal  in  the  proxy  statement and  proxy  in  accordance  with
regulations governing the solicitation of proxies.

     In order for a Shareholder to nominate a candidate for director
under the Company's Bylaws, timely notice of the nomination must  be
received by the Company in advance of the meeting.  Such notice must
be  received  by the Company no later than March 11,  2001,  and  no
earlier  than February 11, 2001.  The Shareholder filing the  notice
of nomination must describe various matters regarding the nominee as
set  forth  in  the Company's Bylaws, including such information  as
name, address, occupation and shares held.

     Under the Company's Bylaws, in order for a Shareholder to bring
other  business before a Shareholder meeting, timely notice must  be
received  by  the  Company within the time limits  described  above.
Such notice must include a description of the proposed business, the
reasons  therefor,  and  other matters specified  in  the  Company's
Bylaws.   These  requirements are separate from and in  addition  to
requirements a Shareholder must meet to have a proposal included  in
the  Company's proxy statement and proxy.  The foregoing time limits
also  apply in determining whether notice is timely for purposes  of
rules adopted by the Securities and Exchange Commission relating  to
the exercise of discretionary voting authority.

      In  each case the notice must be given to the Secretary of the
Company,  whose  address  is  1699 South  Hanley  Road,  St.  Louis,
Missouri  63144.



Issuance of Series B Preferred Stock

     On February 4, 2000, the Company issued 409,091 shares of Series
B  Preferred  Stock  for an aggregate purchase price  of  $9,000,000.
Cumulative  dividends of $1.10 per share per annum are  payable  upon
the  earlier  of  the conversion or redemption of such  share.   Each
share  of  preferred stock may be converted, at  the  option  of  the
holder,  into  one  share of common stock.  The  preferred  stock  is
subject  to  mandatory redemption at a price of $22  per  share  plus
accreted  dividends on February 4, 2005 provided that the holder  has
provided  notice of its intention to have its shares redeemed  on  or
prior  to February 4, 2004.  A provision of the terms of issuance  is
that  the purchaser of the Series B Preferred Stock has the right  to
appoint one (1) member to the Board of Directors of Tripos, Inc.  Dr.
Friedrich von Bohlen was appointed to this position.  The holders  of
Series B Preferred Stock are entitled to the number of votes equal to
the  number of whole shares of Common Stock into which the shares  of
Series B Preferred Stock are then convertible, initially 409,091.




             MATTERS TO BE CONSIDERED AT ANNUAL MEETING

                             PROPOSAL 1:

                    ELECTION OF TYPE I DIRECTORS

      The  Company has two classes of Directors on its  Board.   The
Type  I  class  is made up of five (5) Directors who stand  for  re-
election  by  the  holders of Common shares at each annual  meeting.
The  Type II Class is made up of one (1) director who has been added
to  the  Board  as  a condition under the terms of the  offering  of
Series  B  Preferred  Shares that were sold in a  private  placement
transaction  on February 4, 2000.  This director is not required  to
stand for election by holders of the Common Stock until such time as
the Preferred Stock has been converted into Common Stock.

     The nominees for the Board of Directors in Type I are set forth
below.   The  proxy holders intend to vote all proxies  received  by
them  in the accompanying form FOR the nominees for directors listed
below.  In the event any nominee is unable or declines to serve as a
director at the time of the Annual Meeting, either the size  of  the
Board  will be reduced or the proxies will be voted FOR any  nominee
who  shall be designated by the present Board of Directors  to  fill
the vacancy.  In the event that additional persons are nominated for
election as directors, the proxy holders intend to vote all  proxies
received by them for the nominees listed below.  As of the  date  of
this  Proxy  Statement, the Board of Directors is not aware  of  any
nominee  who is unable or will decline to serve as a director.   The
directors  will serve for a one year term, or until their respective
successors are duly elected and qualified.  Directors are elected by
a  plurality of the votes present in person or represented by  proxy
and entitled to vote at the meeting.

Type I Nominees to Board of Directors

    Name         Director  Age       Name                Director   Age
                  Since                                   Since

Ralph S. Lobdell   1994    56    Alfred Alberts            1997     68
Stewart Carrell    1994    66    John P. McAlister, III    1994     51
Gary Meredith      1996    65    Ferid Murad               1996     63


     Ralph  S.  Lobdell  has  served as Chairman  of  the  Board  of
Directors of the Company since June 1994.  Mr. Lobdell received  his
Bachelor  of Science degree from the U.S. Naval Academy in 1965  and
his  Master  of Business Administration from Stanford University  in
1972.   Mr.  Lobdell worked for First Chicago Corporation from  1972
through  1977, initially on the parent company staff  and  then  its
venture  capital subsidiaries.  In 1977, Mr. Lobdell  joined  Abbott
Laboratories in Chicago in Corporate Planning and Development.   Mr.
Lobdell  worked for the Harbour Group, a St. Louis based  investment
company, from 1979 to 1991 and was appointed President in 1987.   He
served  on  the  Board of Directors of virtually  all  of  Harbour's
portfolio companies acquired during his tenure.

      Alfred Alberts was named a Director of the Company in February
1997.  Mr. Alberts is currently serving on the Board of Directors of
Inflazyme  Pharmaceuticals, Ltd., Vancouver,  and  is  a  scientific
consultant to several major pharmaceutical companies.  He served  as
the Vice President of Biochemistry and Natural Product Discovery  at
Merck  Research Laboratories prior to his retirement in 1995.  Prior
to  joining  Merck, Mr. Alberts was a member of the faculty  of  the
Department of Biochemistry at Washington University, St. Louis.  Mr.
Alberts has co-authored six patents and received several prestigious
awards  including the Thomas Alva Edison Award, the Inventor of  the
Year Award as well as an Honorary Doctor of Science degree from  the
University of Maryland.

      Stewart  Carrell has been a Director of the Company since  May
1994.  He also serves as Chairman of the Board of Directors of Evans
&   Sutherland   Computer  Corporation  and   of   Seattle   Silicon
Corporation.   Between 1984 and 1994, Mr. Carrell was  Chairman  and
Chief Executive Officer of several companies through his association
with the investment banking and venture capital firm of Hambrecht  &
Quist.   Prior  to 1984, Mr. Carrell was employed for  25  years  by
Texas  Instruments in various capacities, the most recent  of  which
was  Executive  Vice President.  Mr. Carrell holds an  undergraduate
degree from Southern Methodist University and a Masters degree  from
Stanford University.

      Dr.  John  P.  McAlister, III has served  as  Chief  Executive
Officer  and  Director since May 1994.  Dr. McAlister  obtained  his
B.S.  in Chemistry from Tarleton State College in 1971 and his Ph.D.
in  Biochemistry  and X-Ray Crystallography from the  University  of
Wisconsin,   Madison,  in  1978.   After  a  two-year  post-doctoral
appointment, Dr. McAlister joined the staff of the Computer  Systems
Laboratory  at Washington University, St. Louis, in 1980,  where  he
served   first   as  Associate  Director  of  the   MMS-X   National
Collaborative  Research Program and then as  Research  Associate  in
Computer  Science.  Dr. McAlister began working for Tripos  in  1982
under  contract  to  supervise software  development  for  molecular
graphics  applications.  In 1984, he joined Tripos  as  Director  of
Software Research and Development.  In 1987, Dr. McAlister was named
Vice  President, Research and Development, and in 1988 was  promoted
to President.

      Gary  Meredith was named a Director of the Company in  January
1996.   He  retired  from his position as Senior Vice  President  of
Evans  &  Sutherland Computer Corporation ("E&S") during 1999.   Mr.
Meredith had been with E&S for twenty-two years during which time he
held  several  positions including Assistant to the  President,  VP-
Administration,   President-Interactive   Systems   Division,    VP-
Development  and Secretary, and Chief Financial Officer.   Prior  to
joining  E&S, he was President of Interwest General Corporation  and
Windsor Industries.  Mr. Meredith also was Chairman and President of
Reid-Meredith,  Inc., a company he founded in  1962.   Mr.  Meredith
received his B.S. degree from Brigham Young University.  In addition
to his position on the Board of Directors of Tripos, Mr. Meredith is
a Director of Regence Blue Cross/Blue Shield of Utah.

     Dr. Ferid Murad was named a Director of the Company in November
1996.   Dr.  Murad  received his M.D. and Ph.D.  from  Case  Western
Reserve  University.   Dr.  Murad is the former  Vice  President  of
Pharmaceutical Research and Development at Abbott Laboratories,  and
formerly, the President and CEO of Molecular Geriatrics Corporation,
a  bio-pharmaceutical  company.  Dr. Murad  has  held  a  number  of
notable  positions  during  his career  including  Chairman  of  the
Department of Medicine at Stanford University, Chief of Medicine  at
Palo Alto Veterans Administration Hospital, and Director of Clinical
Research  at  the  University of Virginia School of  Medicine.   Dr.
Murad was the 1998 co-recipient of the Nobel Prize for Physiology or
Medicine as well as the 1996 recipient of the Albert Lasker  Medical
Research  award and is a member of the National Academy of  Science.
He  is  currently  Professor  and  Chairman  of  the  Department  of
Integrative  Biology, Pharmacology and Physiology at the  University
of Texas Medical School in Houston.

      There are no family relationships among executive officers  or
directors  of  the Company.  No related party transactions  occurred
between the Company and any of the directors or their affiliates.



Type II Director

     Dr.  Friedrich von Bohlen, age 37, was named a Director  of  the
Company  in  February  2000.  He also serves as the  Chief  Executive
Officer of Lion Bioscience AG of Heidelberg, Germany.  Dr. von Bohlen
earned Diplomas in Economics in 1986 and in Biochemistry in 1988 from
the  University  of  Zurich and received his  Ph.D.  from  the  Swiss
Federal  Institute of Technology (ETH) in Zurich in  1992.   Dr.  von
Bohlen  advanced rapidly in his career working first at Fresenius  AG
in  R&D  Project  Management (1992-1993) then  as  assistant  to  the
Chairman of FAG Kugelfischer KgaA responsible for turnaround projects
(1993-1994).  He assumed the position of CEO of WASAG Chemie AG  from
1994  through 1997.  In March 1997, Dr. von Bohlen joined with  three
other   scientists  to  found  LION  Bioscience   AG,   the   leading
bioinformatics  and  genomics company in Germany  at  which  time  he
became its CEO.


Board Meetings and Committees

      During  the fiscal year ended December 31, 1999, the Board  of
Directors of the Company held a total of nine (9) meetings.   During
this  period, a quorum of directors attended or participated in  all
of  (i)  the  meetings  of the Board that were  held  and  (ii)  the
meetings  held  by all committees of the Board of  which  they  were
members.

      The  Board of Directors has an Audit Committee, a Compensation
Committee, an Executive Committee, and a Technical Review Committee.
There  is  no  nominating  committee  or  committee  performing  the
functions of such committee.

       The  Audit  Committee  meets  with  the  Company's  financial
management  and its independent accountants at various times  during
each  year and reviews internal control conditions, audit plans  and
results,   and  financial  reporting  procedures.   This  Committee,
consisting  of Stewart Carrell, Ralph Lobdell, Alfred Alberts,  Gary
Meredith and Ferid Murad, held two (2) meetings during fiscal 1999.

      The  Compensation Committee reviews and approves the Company's
compensation   arrangements   for   management.    This   Committee,
consisting  of Ralph Lobdell, Alfred Alberts, Stewart Carrell,  Gary
Meredith and Ferid Murad, held one (1) meeting during fiscal 1999.

      The  Executive  Committee receives investment  proposals  from
within  and  without  the  Company and decides  whether  they  merit
consideration.  This Committee, consisting of Ralph Lobdell,  Alfred
Alberts,  Stewart Carrell, Gary Meredith and Ferid Murad, held  five
(5) meetings during fiscal 1999.

      The  Technical  Review  Committee  reviews  and  approves  the
mechanisms  by  which scientific and software development  decisions
are  made  by  the  Company.   This Committee,  consisting  of  John
McAlister,  Alfred Alberts, Ferid Murad and several  key  employees,
did not meet during fiscal 1999.

Director Remuneration

      Non-employee members of the Board, except for Mr. Lobdell, are
each paid an annual retainer of $10,000, and are reimbursed for  all
out-of-pocket costs incurred in connection with their attendance  at
all  Board  meetings and applicable committee meetings.  The  annual
retainer  is  paid quarterly in the form of 50% cash and  50%  stock
valued  at  the  then market rate.  Employee members  of  the  Board
receive no additional compensation for their service on the Board.

     Under the Tripos, Inc. 1994 Director Option Plan, an individual
who first becomes a non-employee member of the Board will receive an
automatic  option  grant for 10,000 shares of the  Company's  Common
Stock  upon commencement of Board service, and each individual  with
six or more months of Board service will receive an automatic option
grant  for  an  additional 2,500 shares on January 1 of  each  year.
Options  issued  under  the Tripos, Inc. 1994 Director  Option  Plan
become  exercisable at a rate of twenty-five percent  (25%)  of  the
shares  under  such option on each anniversary of the grant  of  the
option.  There are currently 240,000 shares reserved for issuance of
options  under  the  1994 Director Option  Plan,  as  amended.   The
exercise  price  for  the options granted under  the  1994  Director
Option Plan is equal to the fair market value of the Common Stock as
of  the last trading day immediately prior to the date the option is
granted.   The  options  have a term of ten  years.   However,  each
option automatically terminates 90 days after the optionee ceases to
be  a  director  of  the  Company or ceases  to  be  employed  as  a
consultant  to the Board.  In the event of the optionee's  death  or
disability, the options terminate twelve (12) months from  the  date
of the occurrence.

     Dr. Ferid Murad, receives a $1,000 fee for his role as Chairman
of  the Technical Review Committee for every meeting he attends, and
is  reimbursed  for  all  out-of  pocket  costs  incurred  with  his
attendance at such meetings.

      Mr.  Ralph  Lobdell receives an annual retainer of $25,000  as
Chairman of the Board for the Company, in lieu of the $10,000 annual
retainer  received  by  other non-employee  Board  members,  and  is
reimbursed  for all out-of-pocket expenses related to attendance  at
meetings  of the Board of Directors.  Mr. Lobdell's annual  retainer
is  paid  quarterly in the form of 50% cash and 50% stock valued  at
the then market rate.

      No  other compensation is paid to the non-employee members  of
the Board with respect to service on the Board.

Recommendation of the Board of Directors

      The  Board of Directors recommends that the shareholders  vote
FOR the election of each of the above nominees.


                       OWNERSHIP OF SECURITIES

     The following table sets forth, as of the Record Date, the name
of  each person who owns of record or is known by the Company to own
beneficially more than 5% of the outstanding shares of Common Stock,
the  number of shares owned by all directors, the executive officers
named  in  the  Summary  Compensation Table  (the  "Named  Executive
Officers") and all directors and executive officers as a group,  and
the  percentage of the outstanding shares represented thereby.   The
Company  believes that each of the directors and executive  officers
has  sole  voting  and investment power over such shares  of  Common
Stock.

Holders of More than 5%
                                 Amount and
                                 Nature of         (1)
Name and Address of Beneficial   Beneficial     Percent of
Owner                            Ownership        Class

Brown Capital Management, Inc.  564,000 (2)       14.5%
809 Cathedral Street
Baltimore, Maryland 21201

State  of Wisconsin             378,334 (2)        9.7%
Investment Board
121 East Wilson Street
Madison, Wisconsin  53707

Dimensional Fund                225,265 (2)        5.8%
Advisors, Inc.
1299 Ocean Avenue, 11th Floor
Santa Monica, California 90401

Reed Conner & Birdwell, Inc.    194,655 (2)        5.0%
11111  Santa Monica Boulevard,
Suite 1700
Los Angeles, California 90025

LION Bioscience AG              409,091 (3)       10.5%
Waldhofer Strasse 98
D-69123 Heidelberg, Germany

Directors and Named Executive Officers:

                                 Amount and
                                 Nature of          (1)
Name of Beneficial Owner         Beneficial       Percent
                                 Ownership       of Class

Ralph S. Lobdell                   56,574          1.5%
Alfred Alberts                     10,762           *
Stewart Carrell                    50,543          1.3%
Gary Meredith                       4,598           *
John P. McAlister III             155,434          4.0%
Ferid Murad                        33,728           *
Richard D. Cramer III              57,663          1.5%
Peter Hecht                        35,469           *
Martin Stuart                      40,341          1.0%
Paul L. Weber                      40,629          1.0%
Mary P. Woodward                   41,350          1.1%
All directors and named
executive officers as a
group  (11 persons)               527,091         13.5%

* Less than one percent of the outstanding Common Stock.

(1)     Percentage  of  beneficial ownership is calculated  assuming
  3,487,852 shares of Common Stock were outstanding on April 4, 2000
  plus  the  assumed  conversion into Common Stock  of  the  409,091
  Series  B Preferred Shares.  This percentage also includes  Common
  Stock  of which such individual or entity has the right to acquire
  beneficial ownership within sixty days of April 4, 2000, including
  but not limited to the exercise of an option; however, such Common
  Stock shall not be deemed outstanding for the purpose of computing
  the  percentage  owned by any other individual  or  entity.   Such
  calculation   is  required  by  Rule  13d-3(d)(1)(i)   under   the
  Securities Exchange Act of 1934.

(2)     This  information is based on Schedules 13G filed  with  the
  Securities  and  Exchange Commission (the "SEC").   The  reporting
  entity  attests  that they have sole voting and  investment  power
  over their reported shares of Common Stock.

(3)  Number  of shares and percentage of ownership had the Series  B
  Preferred Stock been converted into Common Stock.

Section  16(a) of the Securities Exchange Act of 1934  requires  the
Company's officers and directors, and persons who own more than  ten
percent  of the Company's Common Stock, to file reports of ownership
and   changes   in  ownership  with  the  Securities  and   Exchange
Commission.    Officers,  directors  and  greater  than  ten-percent
shareholders are required by SEC regulation to furnish  the  Company
with copies of all Section 16(a) forms they file.

Based  on its review of the copies of such forms received by  it,  or
written representations from certain reporting persons that no  year-
end  reports on Forms 5 were required for those persons, the  Company
believes  that,  during  fiscal 1999, its  officers,  directors,  and
greater   than  ten-percent  beneficial  owners  complied  with   all
applicable filing requirements.


                             MANAGEMENT

Set forth below is certain information with respect to additional
executive officers and key employees of the Company not listed in
"Election of Directors":

          Name           Age       Title

Richard D. Cramer, III   58   Vice President, Scientific Activities
Donald R. Felley         57   Senior Director, North America/Asia-Pacific Sales
Peter Hecht              37   Vice President, European Research Operations
Trevor W. Heritage       33   Vice President, Software Research &
                              Development and Marketing
Edward E. Hodgkin        36   Senior Director, Contract & Discovery
                              Research, Americas and Asia
Colleen A. Martin        39   Vice President, Chief Financial Officer,
                              and Secretary
David E. Patterson       48   Senior Fellow
Dieter Schmidt-Baese     41   Senior Director, European Sales
Martin Stuart            43   Vice President, Business Development
Paul L. Weber            41   Vice President, Software Consulting Services
Mary P. Woodward         54   Vice President, Strategic Development
John D. Yingling         43   Corporate Controller and Treasurer


      Dr.  Richard  D.  Cramer, III received his  A.B.  degree  from
Harvard  University in Chemistry and Physics in 1963, and his  Ph.D.
in  Physical  Organic Chemistry from the Massachusetts Institute  of
Technology in 1967.  Dr. Cramer worked for Polaroid Corporation from
1967 through 1969.  This was followed by a two-year fellowship as  a
senior  member of the computer synthesis group at Harvard University
under direction of Dr. E. J. Corey.  Dr. Cramer joined Smith Kline &
French  Laboratories in 1971.  He was awarded a succession of titles
culminating  in Associate Director and Fellow, Medicinal  Chemistry.
Dr.  Cramer joined Tripos in 1983 as Vice President of New  Products
where  he  formulated  the  techniques  of  Comparative    Molecular
Field    Analysis   (CoMFA),  a   patented   software    technology,
at   Tripos.   Dr.  Cramer  was named Vice President  of  Scientific
Activities  in 1988.  Dr. Cramer also founded and previously  served
on the Board of Directors of STATS, Inc.

     Dr.  Donald R. Felley received his B.S. degree in Biology  from
Grove   City  College  in  1964.  He  was  awarded  his   Ph.D.   in
Entomology/Biochemistry from Syracuse University/SUNY in 1970.  From
1970  until  1984  Dr. Felley worked for Rohm and  Haas  Company  in
various  research and international management positions. From  1984
until  joining Tripos, Inc Dr. Felley worked for FMC Corporation  as
Director  of  Asia  and then Director of Europe. Dr.  Felley  joined
Tripos,  Inc.  in  1998 as Director of Asia-Pacific  Sales  and  was
promoted in 1999 to his current position.

      Dr.  Peter  Hecht  received a degree in pharmacy  from  Vienna
University,  Austria in 1987.  From 1987 to 1990 he  worked  at  the
Sandoz  Research  Institute in Vienna on the design  of  anti-fungal
compounds as part of his Ph.D. thesis, which he completed  in  1990.
From  1990 to 1992 he served as a post-doctoral researcher at Tripos
St. Louis, funded initially by Sandoz then by the Erwin Schroedinger
scholarship.   From  1992 to 1995 he worked at the  Sandoz  Research
Institute  in  Vienna  as head of the local computational  chemistry
group.    In  1995,  he  joined  Tripos  in  Munich  and  has   been
establishing  the drug discovery efforts of Tripos as  well  as  the
consultancy  service business in Europe.  Dr. Hecht was promoted  to
Vice  President,  European  Research  Operations  and  additionally,
General Manager of Tripos Receptor Research, in November 1997.

      Dr. Trevor W. Heritage received his Ph.D. in Organic Chemistry
from  University  of Reading, England in 1990.  Dr. Heritage  joined
Shell  Research Ltd. in 1990 as a computational chemist  working  on
the   design  of  agrochemical  products,  catalysts  and  petroleum
additives.   Dr. Heritage joined Tripos in 1994, where he  has  held
scientific  research, marketing, and software development positions.
Dr.   Heritage  has  played  a  leading  role  in  the  design   and
implementation  of  Tripos'  UNITY,  EVA/QSAR,  and  patented  HQSAR
technology.   Dr. Heritage was promoted to Vice President,  Software
Research and Development in April 1998.  In October 1999, he assumed
responsibility for the Corporate Marketing organization.

      Dr.  Edward E. Hodgkin received his M.A. in Chemistry in  1985
and  Ph.D. in 1987 from Oxford University.  Dr. Hodgkin was a  post-
doctoral  fellow  at  Washington University Medical  School  in  St.
Louis,  before joining British Biotech in 1990 as Senior  Scientist.
In  1994  he  joined Wyeth-Ayerst Research in the  UK  as  Principal
Scientist,  relocating to the Princeton, NJ facility in 1995,  where
he   held  a  number  of  positions  including  Associate  Director,
Structural Biology, with responsibility for Computational Chemistry,
X-Ray  Crystallography  and Protein NMR.  During  10  years  in  the
pharmaceutical  industry he has been involved in a wide  variety  of
drug  discovery  projects and therapeutic areas, as scientist,  team
leader  and  manager.  Dr. Hodgkin joined Tripos  in  June  1999  as
Senior Director, Contract and Discovery Research, Americas and Asia.

      Ms.  Colleen A. Martin received her B.S. degree in  Accounting
from the University of Missouri, St. Louis, in 1982 and has attended
Northwestern University's J.L. Kellogg Graduate School of Management
Executive  Programs.   Ms.  Martin, a Certified  Public  Accountant,
worked  on  the  audit  staff for KPMG Peat Marwick  LLP  from  1982
through  1984  and  worked for Continental Cablevision  as  District
Controller from 1984 through 1989.  Ms. Martin joined Tripos in June
1989  as  Controller  and was promoted to Vice President  and  Chief
Financial Officer in April 1995.

      Mr.  David  E. Patterson received his B.S. degree  in  Applied
Mathematics  and  Computer Science in 1974 and an  M.S.  in  Systems
Science  in  1980  from Washington University  in  St.  Louis.   Mr.
Patterson worked as a Senior Research Scientist with the Center  for
Air  Pollution  Impact and Trend Analysis from  1976  until  joining
Tripos  in  1986.  His positions have included Product  Manager  for
QSAR and Senior Director of New Products prior to being promoted  to
Senior Fellow in March 1996.

     Dr.  Dieter  Schmidt-Baese received his Ph.D. in Organometallic
Chemistry  and  Crystallography  from  University  of  Goettingen in
Germany  in  1988.   Dr. Schmidt-Baese worked at the  University  of
Wisconsin  in Madison on Organo Lead Compounds for Protein Structure
Determination  as  a research associate.  After returning  from  the
U.S.  Dr. Schmidt-Baese joined Tripos in 1991,  where  he  has  held
positions  as  Account Manager, Regional Account  Manager  and  most
recently  as Director of Discovery Software Business in  the  Tripos
Munich  office. Dr. Schmidt-Baese was promoted to Senior Director of
European Sales in April 1999.

      Dr.  Martin  Stuart received his B.S. degree  in  Physics  and
Mathematics from the Council for National Academic Awards in  London
in  1982.  He was awarded a Ph.D. in the Physics of Thin Films  from
the  University  College of North Wales in 1986.  Dr.  Stuart  is  a
member  of  the  Institute of Physics and is a Chartered  Physicist.
Dr.  Stuart  joined  3M Company in 1974 and held several  scientific
positions,  and  ultimately, Senior Research  Scientist.   His  work
ranged from optimization of photographic development systems to  the
design of highly efficient drug delivery systems.  Dr. Stuart joined
Tripos  in  1987 to support its products in the United  Kingdom  and
Scandinavia.   He was promoted to Manager of Asia Pacific  Sales  in
1993.  Dr. Stuart was promoted to Vice President of the Americas and
Asia  Pacific  Sales  in February 1996.  In November  1997,  he  was
promoted  to Vice President and General Manager, ADS Products.   Dr.
Stuart  was  promoted  to  Vice President, Sales  and  Marketing  in
November  1998.  In October 1999, he was named to the post  of  Vice
President, Business Development.

      Dr.  Paul L. Weber obtained his B.S. degrees in Chemistry  and
Honors Biology from the University of Illinois, Urbana in 1981.   He
was  awarded  his  Ph.D.  in Biochemistry  from  the  University  of
Washington, Seattle in 1985.  Prior to joining Tripos, Dr. Weber was
employed  as  Director of Scientific Applications at Hare  Research,
Inc.  where  he  was  involved with business  development,  customer
support, sales and program documentation, development and debugging.
Dr.  Weber joined Tripos in January 1991 as the NMR Project Manager.
In  January 1995, Dr. Weber was promoted to Senior Director, Product
Development  and  in  November  1995  to  Vice  President,   Product
Development.  In  1997, Dr. Weber initiated the Software  Consulting
Services  effort  and was named Vice President, Software  Consulting
Services.

      Ms.  Mary P. Woodward obtained her B.A. degree in English from
Creighton  University  in  1967,  her  M.A.  in  English  from   the
University  of  Kansas  in  1969, and  has  taken  courses  in  high
technology,  international marketing and strategic alliance  offered
in  the  Berkeley, Stanford, and Northwestern J.L. Kellogg  Graduate
School  of  Management Executive Programs.  Since joining Tripos  in
1983,  Ms. Woodward has held a series of sales, legal, and marketing
administration positions, and is currently Vice President, Strategic
Development.

      Mr.  John  D. Yingling received his B.S. degree in  Accounting
from  the  University  of Missouri, St. Louis,  in  1979  and  holds
certificates  as a Certified Public Accountant and a Certified  Cash
Manager.  Mr. Yingling worked for Storz Instrument Company, a micro-
surgical   instrument  manufacturer,  in  a  series  of   accounting
positions  from 1979 to 1983 and for Clayton Brokerage Company  from
1983  to  1985.   This was followed by several accounting,  tax  and
treasury  positions at Venture Stores, Inc. from 1985 to 1995.   Mr.
Yingling  joined  Tripos  in May 1995 as  U.S.  Controller  and  was
promoted to Corporate Controller & Treasurer in January 1999.



           EXECUTIVE COMPENSATION AND RELATED INFORMATION

Summary of Cash and Certain Other Compensation

   The  following table sets forth the compensation  earned  by  the
Named Executive Officers for services rendered in all capacities  to
the Company and its subsidiaries for the fiscal years ended December
31, 1999, December 31, 1998, and December 31, 1997.

                     SUMMARY COMPENSATION TABLE

                                              Long-Term
                              Annual        Compensation
                           Compensation        Awards
                                                        Securities
                                                        Underlying   All Other
 Name & Principal      Year  Salary   Bonus    LTIP     Options    Compensation
     Position                ($) (1) ($) (2)  Payouts $  # (3)        ($) (4)

John P. McAlister, III 1999 225,000     -       -        20,000        4,800
President and Chief    1998 202,083     -       -           -          4,656
  Executive Officer    1997 170,833  100,000    -        12,000       10,902

Martin Stuart          1999 175,000    9,375    -        10,000        4,800
   Vice President,     1998 130,894   74,280    -         5,000        6,080
Business Development   1997  89,167   85,222    -        22,500       15,027

Peter Hecht            1999 120,030     -       -        10,000       32,529
   Vice President,     1998 107,358   12,251    -         7,500        9,734
 European Research     1997  73,982   25,525    -        20,000        9,482
        Operations

Mary P. Woodward       1999 137,083     -       -        10,000        4,112
   Vice President,     1998 119,792             -         5,000        3,591
Strategic Development  1997  95,000   26,586    -         5,000        3,648

Paul L. Weber          1999 135,000    1,567    -        10,000        4,050
   Vice President,     1998 122,854    9,916    -         5,000       13,031
Software Consulting    1997  99,000   35,000    -         5,000        4,020
           Services

Richard D. Cramer, III 1999 140,000     -       -        10,000           -
   Vice President,     1998 128,750     -       -        10,000           -
Scientific Activities  1997 115,000   38,669    -         5,000        2,588

(1)  Includes salary deferred under the Company's 401(k) Plan.
(2)  Bonuses  earned were based on an allocation of a  discretionary
  bonus pool.  The 1998 and 1999 bonuses paid to Messrs. Hecht, Stuart and
  Weber included a commission related to achieving targeted revenue goals.
(3)  The  number of shares underlying option grants include  options
  granted to Tripos employees under the 1994 Stock Option Plan.
(4)  For   1999,  "All  Other  Compensation"  includes  a  matching
  contribution to the Company's 401(k) Plan.  Also included for Mr. Hecht
  is a car allowance ($13,594) and housing allowance ($16,507).



Stock Options

   The following table contains information concerning the grant  of
stock options made to the Named Executive Officers in 1999.

                OPTION/SAR GRANTS IN LAST FISCAL YEAR


                                                               Potential
                          Individual Grants                    Realizable
                   Number of   % of Total                      Value at Assumed
                   Securities  Options/                        Annual Rates of
                   Underlying  SARs       Exercise             Stock Price
                   Options/    Granted to Price                Appreciation for
                   SARs        Employees  Per       Expiration Option Term
      Name         Granted     in Fiscal  Share(2)  Date       5% (3)   10% (3)
                               Year
John P. McAlister  20,000(1)    9.0%      $7.6875   5/11/09    $96,693  $245,038
Richard D. Cramer  10,000(1)    4.5%      $7.6875   5/11/09    $48,346  $122,519
Peter Hecht        10,000(1)    4.5%      $7.6875   5/11/09    $48,346  $122,519
Martin Stuart      10,000(1)    4.5%      $7.6875   5/11/09    $48,346  $122,519
Paul L. Weber      10,000(1)    4.5%      $7.6875   5/11/09    $48,346  $122,519
Mary P. Woodward   10,000(1)    4.5%      $7.6875   5/11/09    $48,346  $122,519

(1)     The  options granted under the 1994 Stock Option Plan become
  exercisable  as  to  25%  of  the  option  shares  on  the   first
  anniversary of the grant date and 1/48th per month for three years
  thereafter.  The options have a 10-year term, subject  to  earlier
  termination  in the event of the optionee's cessation  of  service
  with the Company.

(2)     The  exercise price of each option may be paid in  cash,  in
  shares of Common Stock valued at fair market value on the exercise
  date or through a cashless exercise procedure involving a same-day
  sale of the purchased shares.

(3)     The  five percent (5%) and ten percent (10%) assumed  annual
  rates  of compounded stock price appreciation are mandated by  the
  rules  of  the Securities and Exchange Commission.   There  is  no
  assurance provided to any executive officer or any other holder of
  the  Company's securities that the actual stock price appreciation
  over  the  10-year option term will be at the assumed  5%  or  10%
  levels or at any other defined level.


Option Exercises and Holdings

      The  following table provides information with respect to  the
Named  Executive Officers concerning unexercised options held as  of
the end of the 1999 fiscal year.

<TABLE>
           AGGREGATED OPTION EXERCISES IN LAST FISCAL YEAR
                  AND FISCAL YEAR-END OPTION VALUES
<CAPTION>


                                Number of Securities
                   Shares                    Underlying             Value of Unexercised
                   Acquired    Value      Unexercised Options     in-the-Money Options
Name               on Exercise Realized     at Year-End 1999       at  Fiscal Year-End
                     #         $        Exercisable Unexercisable Exercisable   Unexercisable
<S>                  <C>       <C>      <C>         <C>           <C>           <C>
John P. McAlister    0         $0       135,688     26,312        $825,940 (1)  $84,060
Richard D. Cramer    0         $0        56,184     17,916        $292,394 (1)  $39,256
Peter Hecht          0         $0        28,094     24,406        $ 58,681 (1)  $41,068
Martin Stuart        0         $0        28,210     24,290        $ 56,313 (1)  $42,312
Paul L. Weber        0         $0        34,271     15,729        $187,500 (1)  $38,125
Mary P. Woodward     0         $0        42,240     15,260        $235,487 (1)  $39,825

(1)  Based on the fair market value of Tripos Common shares on
December 31, 1999 ($11.50 per share).

</TABLE>

                REPORT OF THE COMPENSATION COMMITTEE

      The  following is the Report of the Compensation Committee  of
the   Board   of   Directors  ("the  Committee"),   describing   the
compensation  policies  and rationale applicable  to  the  Company's
executive  officers with respect to the compensation  paid  to  such
executive  officers  for  the year ended  December  31,  1999.   The
Compensation Committee of the Board of Directors is responsible  for
setting  the  general compensation policies of  the  Company,  which
include  specific compensation levels for executive officers,  bonus
pools,  and  the 1994 Tripos Stock Option Plan.  These programs  and
the  Committee's compensation philosophy are designed to attract and
retain key executives by providing appropriate incentives linked  to
Company  performance. The Committee is composed of all  non-employee
Directors.

Compensation Philosophy

      The  Compensation Committee evaluates the performance  of  the
Chief  Executive Officer and other officers of Tripos annually based
upon  financial and non-financial performance goals which contribute
to the profitability of the Company.  The Compensation Committee has
approved  compensation policies that seek to enhance the linkage  of
compensation  to Company objectives and overall company performance.
The  executive  officers' compensation package is comprised  of  (i)
base  salary, (ii) annual incentive opportunity tied to  achievement
of  Operating Income and other goals, and (iii) long-term incentives
established  to align management with shareholders, in the  form  of
stock   options.  The  Chief  Executive  Officer  recommends  annual
increases for other executives for review and approval by the Board.

                 *  Base Salaries -- Individual salary increases are
          likely to be based on a variety of factors including,  but
          not  limited to: competitive salary levels, individual job
          responsibilities,  results versus target  objectives,  and
          Company financial performance.

                * Annual Incentives -- Effective for fiscal 1995 and
          later  years,  the  Company's officers  were  eligible  to
          participate  in  an  annual incentive  compensation  plan.
          Annual  incentive targets are set as a percent  of  salary
          for  each  officer based on attainment of financial  goals
          including  Operating  Income  and  individual  performance
          goals.   Weighting  of goals varies by participant.   Over
          120%  of the Operating Income goal was achieved in  fiscal
          1996,  therefore a payout related to financial  goals  was
          made in early 1997.  No payout was made in 1998 for fiscal
          1997 or in 1999 for 1998.

                 *  Long-term Incentives -- The Company has  adopted
          the  1994  Tripos Stock Option Plan to attract and  retain
          the  best available personnel for positions of substantial
          responsibility,   to  provide  additional   incentive   to
          employees,  and  to promote the success of  the  Company's
          business.  Awards under the 1994 Tripos Stock Option  Plan
          are  designed  to give the recipient a significant  equity
          stake  in  the  Company and thereby  closely  align  their
          interests  with those of the Company's shareholders.   The
          Committee  has  established certain general guidelines  in
          making  option grants to executive officers in an  attempt
          to  target a fixed number of unvested option shares  based
          upon the individual's position with the Company and his or
          her existing holdings of unvested options.  The number  of
          shares  granted to each executive officer in fiscal  years
          1999,  1998 and 1997 was based upon the officer's  tenure,
          level  of  responsibility, and relative  position  in  the
          Company.   However, the Committee does not adhere strictly
          to these guidelines and will occasionally vary the size of
          the  option  grant  made  to  each  executive  officer  as
          circumstances warrant.

      The  Internal  Revenue  Code, and the  regulations  promulgated
thereunder,  limit  the tax deduction the Company may  recognize  for
compensation  paid  to its executive officers whose  compensation  is
listed in this Proxy Statement, to $1.0 million per person, per year.
This  deduction  limit does not apply to compensation  that  complies
with   applicable  provisions  of  such  regulations.   Because   the
Committee did not expect the compensation to be paid to such  persons
to exceed $1.0 million per person in 1999, the Committee did not take
any action prior to or during 1999 which would have been required  to
comply  with  the  aforementioned regulations so that  the  deduction
limit  would not apply.  The Committee will continue to evaluate  the
other components of the Company's executive compensation program  and
will  take the necessary actions with respect to such regulations  if
it  is deemed appropriate to do so with respect to compensation to be
paid to executive officers in future years.


Chief Executive Officer Compensation

     The  Chairman  and other members of the Compensation  Committee
meet  semi-annually  with  Dr. McAlister  to  discuss  his  personal
performance during the fiscal year.  The Committee's objective is to
have  Dr. McAlister's base salary keep pace with the salaries  being
paid  to  similarly situated CEOs in the software and  biotechnology
industries,  and reflect individual performance and  achievement  of
Tripos  corporate  goals.  Dr. McAlister's base salary  is  reviewed
annually  by  the Compensation Committee based on these  discussions
and other criteria mentioned above.

      Notwithstanding anything to the contrary set forth in  any  of
the Company's previous filings under the Securities Exchange Act  of
1934  that  might incorporate future filings, including  this  Proxy
Statement,  in  whole  or  in part, the  foregoing  report  and  the
Performance  Graph  which  follows  shall  not  be  deemed   to   be
incorporated by reference into any such filing.

          Compensation Committee
          Mr. Ralph S. Lobdell, Chairman
          Mr. Stewart Carrell
          Mr. Gary Meredith
          Dr. Ferid Murad
          Mr. Alfred Alberts


                  COMPARISON OF SHAREHOLDER RETURN

        Indexed Comparison of Total Return since Distribution
        Total Return Index for the NASDAQ National Market and
          Total Return for NASDAQ Pharmaceutical Companies

Graph of the following data is presented here in document distributed
to Shareholders.

                 6/1/94 12/31/94 12/31/95 12/31/96 12/31/97 12/31/98 12/31/99
NASDAQ           100.00  103.15   145.79   179.37   219.79   309.64   562.87
Pharmaceuticals  100.00   97.46   178.76   179.31   185.16   235.81   438.86
Tripos, Inc.     100.00   86.36   154.55   213.64   265.91   138.64   209.09


 Note:     Assumes $100 invested on 6/1/94 in the Company, the total
  return index for the NASDAQ National Market and the total return
                   index for NASDAQ Pharmaceutical
  Companies.  Assumes reinvestment of dividends on a daily basis.

      The  graph covers the period from June 1, 1994, the  date  the
Company's distribution of Common Stock to holders of record  of  the
Common  Stock  of  E&S  commenced, through  the  fiscal  year  ended
December 31, 1999.  The graph assumes that $100 was invested on June
1, 1994 in the Company's Common Stock and in each index and that all
dividends were reinvested.  No cash dividends have been declared  on
the  Company's Common Stock.  Shareholder returns over the indicated
period  should  not  be considered indicative of future  shareholder
returns.


                            ANNUAL REPORT

      A copy of the Annual Report of the Company for the fiscal year
ended December 31, 1999 has been mailed concurrently with this Proxy
Statement to all shareholders entitled to notice of and to  vote  at
the  Annual  Meeting. The Company filed a Form 10-K  with  the  SEC.
Shareholders may obtain a copy of the Form 10-K without  charge,  by
writing  to  Colleen Martin/Corporate Secretary,  at  the  Company's
executive  offices  at 1699 South Hanley Road, St.  Louis,  Missouri
63144.

             SELECTION OF INDEPENDENT PUBLIC ACCOUNTANTS

       Ernst  & Young LLP, independent certified public accountants,
has been selected by the Board of Directors as the firm to audit the
accounts  and to report on the financial statements of  the  Company
for the current fiscal year ending December 31, 2000.  Neither Ernst
&  Young  LLP,  nor  any of its members has any financial  interest,
direct  or indirect, in the Company, nor has Ernst & Young LLP,  nor
any of its members ever been connected with the Company as promoter,
underwriter, voting trustee, director, officer or employee.   It  is
anticipated  that a representative of Ernst & Young LLP will  attend
the  meeting  and  shall  be  available to  respond  to  appropriate
questions.  It is not anticipated that the representative from Ernst
& Young LLP will make any statement or presentation.



                            OTHER MATTERS

      The  Board  of  Directors does not know of any matters  to  be
presented  at this Annual Meeting other than those set forth  herein
and in the Notice accompanying this Proxy Statement.

                                   TRIPOS, INC.



                                   Colleen A. Martin
                                   Corporate Secretary

                                   April 7, 2000
                                   St. Louis, Missouri




THE BOARD OF DIRECTORS RECOMMENDS A VOTE "FOR"THE FOLLOWING
PROPOSALS.
                                             Please mark
                                             your votes as
                                             indicated in
                                             this example   X

1. Election of Directors               2. In their discretion, the
                                       proxies are authorized to vote on
                                       such other business as may properly
FOR all             WITHHOLD           come before this meeting, or any
nominees listed     AUTHORITY          adjournments or postponements thereof.
below (except       to vote for all
as marked to the    nominees listed
contrary below)     below

[   ]               [   ]

(INSTRUCTION: To withhold authority to vote for any individual nominee,
strike a line through the nominee's name in the list below.)

01 Ralph Lobdell     03 Alfred Alberts   05 Stewart Carrell
02 John McAlister    04 Gary Meredith    06 Ferid Murad

                                       This proxy, when properly
                                       executed, will be voted in the
                                       manner directed herein
                                       by the undersigned shareholder. IF
                                       NO DIRECTION IS MADE, THIS PROXY
                                       WILL BE VOTED FOR PROPOSAL 1.

                                      Dated: ________________ , 2000



                                      _____________________________________
                                      Signature*



                                      _____________________________________
                                      Signature, if held jointly*

                                      *Please sign exactly as name
                                      appears on this form. When signing
                                      as attorney, executor, administrator,
                                      trustee, or guardian, please give full
                                      title as such. If a corporation, please
                                      sign in full corporate name by President
                                      or other authorized officer. If a
                                      partnership, please sign in
                                      partnership name by an authorized
                                      person.


 PLEASE MARK, SIGN, DATE AND RETURN THIS PROXY PRIOR TO THE MEETING.



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                            Tripos, Inc.
     THIS PROXY IS SOLICITED ON BEHALF OF THE BOARD OF DIRECTORS
                                                        April 7, 2000

     The  undersigned hereby appoints Colleen A. Martin and  John  D.
Yingling with full power of substitution in each, as proxies to  cast
all  votes which the undersigned shareholder is entitled to  cast  at
the  annual  meeting of shareholders to be held on May 11,  2000,  at
1:00  p.m., local time, at the World Trade Center St. Louis,  121  S.
Meramec,  10th Floor, Clayton, Missouri, 63105, or at any adjournment
thereof,  as follows (1) as hereinafter specified upon the  proposals
listed  on  the  reverse and as more particularly  described  in  the
Company's  proxy statement, receipt of which is hereby  acknowledged;
and  (2)  in their discretion upon such other matters as may properly
come before the Annual Meeting of Shareholders.

   PLEASE DETACH AND MARK THE PROXY, SIGN IT ON THE REVERSE SIDE,
     AND RETURN IT IN THE ENVELOPE PROVIDED BEFORE THE MEETING.


                        FOLD AND DETACH HERE




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