AVIRON
424B2, 1999-12-16
BIOLOGICAL PRODUCTS, (NO DIAGNOSTIC SUBSTANCES)
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<PAGE>   1

                                           Filing Pursuant to Rule 424(b)(2)
                                           Registration Statement No. 333-87185

                           PROSPECTUS SUPPLEMENT No. 2

                      (TO PROSPECTUS DATED OCTOBER 8, 1999)

                                     SHARES

                                     AVIRON

                                  COMMON STOCK

                                 ---------------

        You should read this prospectus supplement and the accompanying
prospectus carefully before you invest. Both documents contain information you
should consider carefully before making your investment decision.

        INVESTING IN OUR COMMON STOCK INVOLVES CERTAIN RISKS. SEE "RISK FACTORS"
BEGINNING ON PAGE 6.

                              PLAN OF DISTRIBUTION

        We are offering 258,408 shares of our common stock to Ridgeway
Investment Limited pursuant to this prospectus supplement. The common stock will
be purchased at a negotiated purchase price of $15.4794 per share. We will not
pay any other compensation in conjunction with the sale of our common stock.

        Ridgeway and its pledgees, donees, transferees and other subsequent
owners, may offer their shares at various times in one or more of the following
transactions:

        -      in the over-the-counter market; or

        -      in privately negotiated transactions

at prevailing market prices at the time of sale, at prices related to those
prevailing market prices, at negotiated or at fixed prices.


        The transactions in the shares may be effected by one or more of the
following methods:

                                      S-1
<PAGE>   2



        -      ordinary brokerage transactions and transactions in which the
               broker solicits purchasers;

        -      purchases by a broker or dealer as principal, and the resale by
               that broker or dealer for its account under this prospectus,
               including resale to another broker or dealer;

        -      block trades in which the broker or dealer will attempt to sell
               the shares as agent but may position and resell a portion of the
               block as principal in order to facilitate the transaction; or

        -      negotiated transactions between selling stockholders and
               purchasers without a broker or dealer.

        Ridgeway is an "underwriter" within the meaning of the Securities Act in
connection with its sale of the shares purchased from us described in this
prospectus supplement. Broker-dealers or other persons acting on the behalf of
parties that participate in the distribution of the shares may also be deemed to
be underwriters. Any commissions or profits they receive on the resale of the
shares may be deemed to be underwriting discounts and commissions under the
Securities Act.

        During the time Ridgeway is engaged in distributing shares covered by
this prospectus, Ridgeway will comply with the requirements of the Securities
Act and Rule 10b-5 and Regulation M under the Exchange Act. Under those rules
and regulations, they:

        -      may not engage in any stabilization activity in connection with
               our securities;

        -      must furnish each broker which offers shares of common stock
               covered by this prospectus with the number of copies of this
               prospectus which are required by each broker; and

        -      may not bid for or purchase any of our securities or attempt to
               induce any person to purchase any of our securities other than as
               permitted under the Exchange Act.

        In connection with Ridgeway's purchase and potential resale of the
shares covered by this prospectus supplement, we will agree to indemnify and
hold harmless Ridgeway and each person who controls Ridgeway against certain
liabilities, including liabilities under the Securities Act, which may be based
upon, among other things, any untrue statement or alleged untrue statement of a
material fact or any omission or alleged omission of a material fact, unless
made or omitted in reliance upon written information provided to us by Ridgeway.

        We have agreed to bear the expenses incident to the registration of the
shares, other than selling discounts and commissions. These expenses are
estimated to be $100,000.

                                 USE OF PROCEEDS

        We will use the proceeds of this offering as described in the
prospectus. See "Use of Proceeds" beginning on page 11.

                                      S-2
<PAGE>   3

                       WHERE YOU CAN FIND MORE INFORMATION

        The SEC allows us to "incorporate by reference" information that we file
with them, which means that we can disclose important information that we file
with them, which means that we can disclose important information to you by
referring you to those documents. The information incorporated by reference is
an important part of this prospectus supplement and the accompanying prospectus.
We incorporate the documents listed below, in addition to those indicated on
page 2 of the prospectus:

               -      Quarterly Report on Form 10-Q for the quarter ended
                      September 30, 1999, filed on November 15, 1999.

                           MARKET FOR OUR COMMON STOCK

        On December 15, 1999, the last reported sale price of our common stock
on the Nasdaq National Market was $16.25 per share. Our common stock is listed
on the Nasdaq National Market under the symbol "AVIR." The common stock sold
under this prospectus supplement will be listed on the Nasdaq National Market
after we notify the Nasdaq National Market that the shares have been issued.

        As of December 15, 1999, we had 16,283,677 shares of common stock
outstanding.

                                     GENERAL

        You should rely only on the information provided or incorporated by
reference in this prospectus supplement and the prospectus. We have not
authorized anyone else to provide you with different information. You should not
assume that the information in this prospectus supplement is accurate as of any
date other than the date on the front of these documents.

        NEITHER THE SECURITIES EXCHANGE COMMISSION NOR ANY STATE SECURITIES
COMMISSION HAS APPROVED OR DISAPPROVED OF THE SECURITIES OR PASSED UPON THE
ACCURACY OR ADEQUACY OF THIS PROSPECTUS. ANY REPRESENTATION TO THE CONTRARY IS A
CRIMINAL OFFENSE.

          The date of this prospectus supplement is December 16, 1999.

                                      S-3
<PAGE>   4




                                TABLE OF CONTENTS

<TABLE>
<CAPTION>
                                                                           PAGE

PROSPECTUS SUPPLEMENT
<S>                                                                         <C>
        Plan of Distribution ............................................  S-1
        Use of Proceeds..................................................  S-1
        Where You Can Find More Information..............................  S-2
        Market for Our Common Stock......................................  S-2
        General..........................................................  S-3

PROSPECTUS
        Where You Can Find More Information..............................    2
        Summary..........................................................    4
        The Company......................................................    4
        The Offering.....................................................    5
        Risk Factors.....................................................    6
        Forward-Looking Statements.......................................   11
        Use of Proceeds..................................................   11
        Plan of Distribution.............................................   13
        Legal Matters....................................................   13
        Experts..........................................................   13
</TABLE>

                                      S-4


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