BROOKS AUTOMATION INC
10-Q, 1999-08-16
SPECIAL INDUSTRY MACHINERY, NEC
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<PAGE>

                                 UNITED STATES
                      SECURITIES AND EXCHANGE COMMISSION
                            Washington, D.C. 20549

                           United States of America

                                   FORM 10-Q


(Mark One)

          [X]  Quarterly Report Pursuant to Section 13 or 15(d) of the
               Securities Exchange Act of 1934

               For the quarterly period ended: June 30, 1999

                                       OR

          [ ]  Transition Report Pursuant to Section 13 or 15(d) of the
               Securities Exchange Act of 1934

               For the transition period from _______ to _______

                         Commission File Number 0-25434
                                                -------


                             BROOKS AUTOMATION, INC.
             (Exact name of registrant as specified in its charter)

           Delaware                                       04-3040660
           --------                                       ----------
(State or other jurisdiction of                        (I.R.S. Employer
incorporation or organization)                        Identification No.)

                               15 Elizabeth Drive
                            Chelmsford, Massachusetts
                    (Address of principal executive offices)

                                      01824
                                   (Zip Code)

       Registrant's telephone number, including area code: (978) 262-2400

                  ---------------------------------------------

Indicate by check mark whether the registrant: (1) has filed all reports
required to be filed by Section 13 or 15(d) of the Securities Exchange Act of
1934 during the preceding 12 months (or for such shorter period that the
registrant was required to file such reports), and (2) has been subject to such
filing requirements for the past 90 days.

                             Yes [X]     No [ ]

     As of August 9, 1999, there were outstanding 11,108,476 shares of the
     Company's Common Stock, $0.01 par value.

     This report, including all exhibits and attachments, contains 23 pages.
<PAGE>

                             BROOKS AUTOMATION, INC.

                                      INDEX



<TABLE>
<CAPTION>
                                                                                            Page
PART I.          FINANCIAL INFORMATION                                                    Number(s)
- -------          ---------------------                                                    ---------
<S>              <C>                                                                      <C>
Item 1            Financial Statements:

                  Condensed Consolidated Balance Sheets at June 30, 1999
                    and September 30, 1998                                                    3

                  Condensed Consolidated Statements of Operations for the nine months
                    and three months ended June 30, 1999 and 1998                             4

                  Condensed Consolidated Statements of Cash Flows for the nine months
                    ended June 30, 1999 and 1998                                              5

                  Notes to Condensed Consolidated Financial Statements                        6-8

Item 2            Management's Discussion and Analysis of Financial Condition and
                    Results of Operations                                                     9-14

Item 3            Quantitative and Qualitative Disclosures about Market Risk                  15

Risk Factors                                                                                  16-21

PART II.         OTHER INFORMATION
- --------         -----------------

Item 6            Exhibits and Reports on Form 8-K                                            22

Signatures                                                                                    23
</TABLE>


                                  Page 2 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.
                      CONDENSED CONSOLIDATED BALANCE SHEETS


<TABLE>
<CAPTION>
(In thousands, except share data)                                                    June 30,        September 30,
                                                                                       1999               1998
                                                                                    ---------          ---------
                                                                                   (unaudited)
<S>                                                                                 <C>                <C>
Assets
Current assets:
   Cash and cash equivalents                                                        $  68,101          $  68,161

   Accounts receivable, net of allowances for doubtful accounts of
      $1,719 and $1,898, respectively, and including related party
      receivables of $3,548 and $2,365, respectively                                   25,340
                                                                                                          20,701
   Inventories                                                                         19,085             19,589
   Prepaid expenses and other current assets                                           10,114              9,641
                                                                                    ---------          ---------
      Total current assets                                                            122,640            118,092

Fixed assets, net                                                                      17,230             18,606
Other assets                                                                           10,079              4,254
                                                                                    ---------          ---------
      Total assets                                                                  $ 149,949          $ 140,952
                                                                                    =========          =========

Liabilities and Stockholders' Equity
Current liabilities:
   Accounts payable                                                                 $   6,539          $   5,505
   Accrued expenses and other current liabilities                                      18,311             12,666
                                                                                    ---------          ---------
      Total current liabilities                                                        24,850             18,171

Long-term liabilities                                                                   1,518              1,018
                                                                                    ---------          ---------
      Total liabilities                                                                26,368             19,189
                                                                                    ---------          ---------
Minority Interest                                                                       1,500                  -
                                                                                    ---------          ---------
Stockholders' equity:
   Preferred stock, $0.01 par value; 1,000,000 shares authorized;  none
      issued and outstanding                                                              --                 --
   Common stock, $0.01 par value;  21,500,000 shares authorized; 11,069,774
      and 11,007,281 shares issued and outstanding, respectively                          111                110
   Additional paid-in capital                                                         129,340            128,839
   Cumulative translation adjustment                                                     (573)              (536)
   Deferred compensation                                                                  (79)              (119)
   Accumulated deficit                                                                 (6,718)            (6,531)
                                                                                    ---------          ---------
      Total stockholders' equity                                                      122,081            121,763
                                                                                    ---------          ---------
      Total liabilities and stockholders' equity                                    $ 149,949          $ 140,952
                                                                                    =========          =========
</TABLE>



                 The accompanying notes are an integral part of
               these condensed consolidated financial statements.


                                  Page 3 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.
                 CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
                                   (unaudited)


<TABLE>
<CAPTION>
(In thousands, except share related data)                 Nine months ended June 30,   Three months ended June 30,
                                                             1999           1998           1999           1998
                                                           --------       --------       --------       --------
<S>                                                        <C>            <C>            <C>            <C>
Revenues:
   Product                                                 $ 54,140       $ 64,674       $ 20,504       $ 20,895
   Services                                                  15,309         14,876          5,860          4,932
                                                           --------       --------       --------       --------
     Total revenues                                          69,449         79,550         26,364         25,827
                                                           --------       --------       --------       --------

Cost of revenues:
   Product                                                   28,826         47,016         10,801         15,743
   Services                                                   9,555          9,795          3,603          2,719
                                                           --------       --------       --------       --------
     Total cost of revenues                                  38,381         56,811         14,404         18,462
                                                           --------       --------       --------       --------

Gross profit                                                 31,068         22,739         11,960          7,365
                                                           --------       --------       --------       --------

Operating expenses:
   Research and development                                  13,661         17,994          4,864          5,050
   Selling, general and administrative                       19,145         20,750          7,225          6,249
                                                           --------       --------       --------       --------
     Total operating expenses                                32,806         38,744         12,089         11,299
                                                           --------       --------       --------       --------

Loss from operations                                         (1,738)       (16,005)          (129)        (3,934)
Interest income, net                                         (2,087)        (2,236)          (614)          (728)
                                                           --------       --------       --------       --------

Income (loss) before income taxes                               349        (13,769)           485         (3,206)
Income tax provision (benefit)                                  536         (1,541)           232           (254)
                                                           --------       --------       --------       --------

Net income (loss)                                              (187)       (12,228)           253         (2,952)
Dividends on preferred stock                                   --              391           --              130
                                                           --------       --------       --------       --------

Net income (loss) attributable to common stockholders      $   (187)      $(12,619)      $    253       $ (3,082)
                                                           ========       ========       ========       ========

Earnings (loss) per share:
   Basic                                                   $  (0.02)      $  (1.23)      $   0.02       $  (0.30)
   Diluted                                                 $  (0.02)      $  (1.23)      $   0.02       $  (0.30)

Shares used in computing earnings (loss) per share:
   Basic                                                     11,039         10,252         11,061         10,285
   Diluted                                                   11,039         10,252         11,814         10,285
</TABLE>


                 The accompanying notes are an integral part of
               these condensed consolidated financial statements.

                                  Page 4 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.
                 CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS
                                   (unaudited)


<TABLE>
<CAPTION>
                                                                               Nine months ended June 30,
(In thousands)                                                                   1999              1998
                                                                               --------          --------
<S>                                                                            <C>               <C>
Cash flows from operating activities:
Net loss                                                                       $   (187)         $(12,228)
  Adjustments to reconcile net loss to net cash provided by (used in)
    operating activities:
     Depreciation and amortization                                                5,390             5,298
     Compensation expense related to common stock
       options                                                                       40                96
     Deferred income taxes                                                       (1,058)           (1,596)
     Changes in operating assets and liabilities:
       Accounts receivable                                                          899            10,396
       Inventories                                                                  786              (285)
       Prepaid expenses and other current assets                                   (258)             (303)
       Accounts payable                                                             (86)           (2,808)
       Accrued expenses and other current liabilities                             2,034              (481)
                                                                               --------          --------
          Net cash provided by (used in) operating
          activities                                                              7,560            (1,911)
                                                                               --------          --------

Cash flows from investing activities:
Purchases of fixed assets, net                                                   (2,837)           (4,004)
Purchase of businesses, net of cash acquired                                     (6,451)             --
Minority holder investment in joint venture                                       1,500              --
Increase in other assets                                                           (318)             (100)
                                                                               --------          --------
          Net cash used in investing activities                                  (8,106)           (4,104)
                                                                               --------          --------

Cash flows from financing activities:
Principal payments on long-term debt and capital lease obligations                 (191)             (357)
Proceeds from line of credit                                                         --             1,166
Proceeds from issuance of common stock                                              502               673
                                                                               --------          --------
          Net cash provided by financing activities                                 311             1,482
                                                                               --------          --------

Elimination of net cash activities of FASTech for the
   three months ended December 31, 1997                                            --              (1,761)

Effects of exchange rate changes on cash and cash
   equivalents                                                                      175              (736)
                                                                               --------          --------

Net decrease in cash and cash equivalents                                           (60)           (7,030)

Cash and cash equivalents, beginning of period                                   68,161            75,253
                                                                               --------          --------
Cash and cash equivalents, end of period                                       $ 68,101          $ 68,223
                                                                               ========          ========
</TABLE>

                 The accompanying notes are an integral part of
               these condensed consolidated financial statements.

                                  Page 5 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.

              NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
                                   (unaudited)


1.    Basis of  Presentation
      ----------------------

      The accompanying unaudited condensed consolidated financial statements of
      Brooks Automation, Inc. and its subsidiaries (the "Company") have been
      prepared in accordance with generally accepted accounting principles and
      the instructions to Article 10 of Securities and Exchange Commission
      Regulation S-X. Accordingly, they do not include all of the information
      and footnotes required by generally accepted accounting principles for
      complete financial statements. In the opinion of management, all
      adjustments, consisting of normal recurring adjustments, considered
      necessary for a fair presentation have been included. The financial
      statements for the nine and three months ended June 30, 1998, have been
      restated to reflect the fiscal 1998 acquisition of FASTech Integration,
      Inc., which was accounted for under the pooling of interests method.
      Certain prior year balances have been reclassified to conform to the
      current year presentation. For further information, refer to the audited
      consolidated financial statements of the Company that are included in the
      Company's Annual Report on Form 10-K for the year ended September 30,
      1998.

      The results of operations for the nine months and three months ended June
      30, 1999 are not necessarily indicative of the results that may be
      expected for other quarters or the entire fiscal year.

2.    Inventories
      -----------

      Inventories consist of the following (in thousands):

<TABLE>
<CAPTION>
                                                   June 30,        September 30,
                                                     1999               1998
                                                   -------            -------

<S>                                                <C>                <C>
      Raw materials and purchased parts            $ 6,258            $ 8,815
      Work-in-process                                9,485              7,878
      Finished goods                                 3,342              2,896
                                                   -------            -------
                                                   $19,085            $19,589
                                                   =======            =======
</TABLE>


3.    Earnings (Loss) Per Share
      -------------------------

      The following is a summary of the shares used in computing basic and
      diluted earnings (loss) per share (in thousands):


<TABLE>
<CAPTION>
                                                                      Nine months ended       Three months ended
                                                                           June 30,                June 30,
                                                                       1999        1998        1999        1998
                                                                      ------      ------      ------      ------
<S>                                                                   <C>         <C>         <C>         <C>
      Weighted average shares outstanding used in computing
         basic earnings (loss) per share                              11,039      10,252      11,061      10,285
      Dilutive effect of stock options                                  --          --           753        --
                                                                      ------      ------      ------      ------
      Shares used in computing diluted earnings (loss) per share      11,039      10,252      11,814      10,285
                                                                      ======      ======      ======      ======
</TABLE>

      For the nine months ended June 30, 1999 and 1998 and the three months
      ended June 30, 1998 diluted loss per share does not differ from basic
      loss per share since potential common shares from the exercise of
      stock options are anti-dilutive.

4.    Comprehensive Income (Loss)
      ---------------------------

      The Company adopted Statement of Financial Accounting Standards ("SFAS")
      No. 130, "Reporting Comprehensive Income" in the first quarter of fiscal
      1999. SFAS No. 130 establishes new rules for the reporting and display of
      comprehensive income and its components. The adoption of SFAS No. 130 had
      no impact on the Company's net income (loss) or stockholders' equity.
      Total comprehensive income (loss), which was comprised of net income
      (loss) and foreign currency translation adjustments, was as follows (in
      thousands):

                                  Page 6 of 23
<PAGE>

<TABLE>
<CAPTION>
                                                   Nine months ended June 30,   Three months ended June 30,
                                                      1999           1998           1999           1998
                                                    --------       --------       --------       --------
<S>                                                 <C>            <C>            <C>            <C>
      Net income (loss)                             $   (187)      $(12,228)      $    253       $ (2,952)
      Foreign currency translation adjustments           (37)          (466)          (142)          (255)
                                                    --------       --------       --------       --------
      Total comprehensive income (loss)             $   (224)      $(12,694)      $    111       $ (3,207)
                                                    ========       ========       ========       ========
</TABLE>

5.    Recent Accounting Pronouncements
      --------------------------------

      In June 1997, the Financial Accounting Standards Board ("FASB") issued
      SFAS No. 131, "Disclosures about Segments of an Enterprise and Related
      Information," which establishes standards for reporting information on
      operating segments in interim and annual financial statements. The
      statement is effective for the Company for fiscal 1999, however, there are
      no interim disclosure requirements in the year of adoption. Adoption of
      this statement will not have an impact on the Company's results of
      operations or financial position.

      In June 1998, the FASB issued SFAS No. 133, "Accounting for Derivative
      Instruments and Hedging Activities." In July 1999, the FASB issued SFAS
      No. 137 which delayed the effective date of SFAS No. 133 to fiscal years
      beginning after June 15, 2000 (fiscal 2001 for the Company) and requires
      that all derivative instruments be recorded on the balance sheet at their
      fair value. Changes in the fair value of derivatives are recorded each
      period in current earnings or other comprehensive income, depending on
      whether a derivative is designated as part of a hedge transaction and, if
      it is, the type of hedge transaction. Management anticipates that the
      adoption of SFAS No. 133 will not have a material impact on the Company's
      results of operations or financial position.

6.    Significant Customers and Related Party Information
      ---------------------------------------------------

      For the nine months ended June 30, 1999 and 1998, the Company had revenues
      from a related party representing 14% and 17% of revenues, respectively.
      For the three months ended June 30, 1999 and 1998, the Company had
      revenues from a related party representing 21% and 13% of revenues,
      respectively. At June 30, 1999 and September 30, 1998, accounts receivable
      from a related party accounted for 14% and 11% of total accounts
      receivable, respectively.

      For the nine months ended June 30, 1999 the Company had revenues from two
      customers (not related parties) representing 11% and 10% of revenues. For
      the three months ended June 30, 1999, the Company had revenues from a
      customer (not a related party) representing 11% of revenues. At September
      30, 1998, accounts receivable from one customer (not a related party)
      represented 14% of total accounts receivable.

7.    Contingency
      -----------

      There has been substantial litigation regarding patent and other
      intellectual property rights in the semiconductor and related industries.
      The Company has received notice from a third party alleging infringements
      of such party's patent rights by certain of the Company's products. The
      Company believes the patents claimed may be invalid. In the event of
      litigation with respect to this claim, the Company is prepared to
      vigorously defend its position. However, because patent litigation can be
      extremely expensive and time consuming, the Company may seek to obtain a
      license to one or more of the disputed patents. There can be no assurance,
      however, that a license will be available on reasonable terms or at all.
      The Company could decide, in the alternative to resort to litigation to
      challenge such claims or to design around the patented technology.
      Currently, the Company does not believe that it is probable that future
      events related to this threatened matter will have a material adverse
      effect on the Company's business.

8.    Acquisitions
      ------------

      In April 1999 the Company acquired the assets of Hanyon Technology, Inc.
      ("Hanyon") for $6.6 million in cash.  Hanyon, based in Korea, provides
      Manufacturing Executing Systems (MES) and automation software and systems
      integration services to the semiconductor and liquid crystal display
      industries in Korea and Taiwan. The Hanyon acquisition was accounted for
      as a purchase of assets.

                                  Page 7 of 23
<PAGE>

      In June 1999, the Company acquired the assets of Domain Manufacturing
      Corporation for $3.8 million in cash. Domain is a leading developer of
      process development, data analysis, and advanced process control
      solutions. The Domain acquisition was accounted for as a purchase of
      assets.

      The Company amortizes goodwill from the purchase of these companies over a
      period of five years.

      In June 1999 the Company formed a joint venture in Korea with Samsung
      Electronics. The Company's initial cash investment in this joint venture
      was $3.5 million. This joint venture is 70% owned by the Company and 30%
      owned by Samsung, and has been organized to design, develop, and
      manufacture atmospheric flat panel display loaders along with other
      products. The Company consolidates the financial results of the joint
      venture and accounts for the minority interest in the financial
      statements.


9.    Subsequent Events
      -----------------

      In July 1999, the Company entered into a merger agreement with Smart
      Machines, Inc., subject to Smart Machines shareholders' approval and other
      customary closing conditions. If the merger is completed, the Company
      would issue approximately $12.5 million in the Company's common stock to
      former Smart Machines stockholders and noteholders. Smart Machines is
      located in San Jose, California and manufactures direct drive Selectively
      Compliant Assembly Robot Arm, or SCARA, atmospheric and vacuum robots. The
      merger is expected to be accounted for as a pooling of interest.

      In July 1999, the Company has also signed a letter of intent to acquire
      substantially all of the assets and assume certain liabilities of the
      Infab division of Jenoptik AG in exchange for 1,086,630 shares of the
      Company's common stock. The Infab division is a worldwide supplier of
      advanced factory automation systems headquartered in Germany. As part of
      the proposed transaction, Jenoptik would be entitled to representation on
      the Company's Board of Directors and Jenoptik would agree to various
      restrictions on its acquisition or disposition of the Company's common
      stock. The proposed acquisition is subject to the completion by the
      Company of substantial due diligence on the Infab division, the
      negotiation and resolution of significant business and legal issues, and
      the negotiation and completion of a mutually satisfactory acquisition
      agreement among the parties. The Company can not guarantee that this
      transaction will be completed on acceptable terms, or be completed at all.
      The proposed acquisition, if completed, would be accounted for as a
      purchase of assets.

                                  Page 8 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.

            ITEM 2. MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL
                       CONDITION AND RESULTS OF OPERATIONS

      Certain statements in this quarterly report constitute "forward-looking
      statements" which involve known risks, uncertainties, and other factors
      which may cause the actual results, performance, or achievements of the
      Company to be materially different from any future results, performance,
      or achievements expressed or implied by such forward-looking statements.
      Such factors include the factors that may affect future results set forth
      in Management's Discussion and Analysis of Financial Condition and Results
      of Operations, which is included in this report. Precautionary statements
      made herein should be read as being applicable to all related
      forward-looking statements wherever they appear in this report.

      OVERVIEW

      Brooks Automation, Inc. (the "Company") is a leading supplier of tool and
      factory automation solutions for the global semiconductor, data storage
      and flat panel display manufacturing industries. Founded in 1978, the
      Company has distinguished itself as a technology and market leader,
      particularly in the demanding cluster-tool vacuum-processing environment.
      The Company's products have evolved from individual robots used to
      transfer semiconductor wafers in advanced production equipment to fully
      integrated handling systems that increase the throughput and utilization
      of equipment used to make semiconductors and flat panel displays.

      In 1992 the Company introduced the family of vacuum central wafer handling
      systems and modules that forms the foundation of the Company's current
      business. In 1994 the Company introduced a similar family of systems and
      modules for flat panel display substrates, including a next-generation
      magnetically driven vacuum transfer robot. In 1996 the Company acquired
      Techware Systems Corporation, a designer and supplier of integrated
      equipment control software for the semiconductor and related industries,
      expanding its software and control capability. In 1997 the Company
      introduced a line of products for the atmospheric handling market,
      including in-line and controlled environment systems, robots, aligners and
      traversers. In 1999, the Company developed a next-generation 200mm and
      300mm wafer handling system, the Gemini Express 6000, which features the
      LeapFrog robot and offers improvement in flexibility permitting multiple
      wafer sizes to be handled concurrently.

      In 1998, the Company expanded its integration software capabilities by
      acquiring FASTech Integration, Inc. FASTech designs, develops, markets and
      supports an integrated suite of manufacturing execution system workflow
      software product for the semiconductor, electronics and general discrete
      manufacturing industries, further expanding the Company's integration
      software capabilities. In 1999 the Company acquired Hanyon Technology,
      Inc. and Domain Manufacturing Corporation to enhance its position in
      factory automation software through integrated process control and
      optimization solutions. In 1999 the Company entered into a joint venture
      with Samsung Electronics to design, develop and manufacture automation
      systems in Korea.

      The Company's revenues include sales of hardware and software products.
      The Company's service revenues include revenue from maintenance contracts
      and fixed fee application consulting contracts.

      The majority of the Company's revenues have been generated by sales to
      customers in the United States, although the Company believes that a
      significant portion of these customers incorporate the Company's products
      into equipment sold to their foreign customers. The Company's foreign
      sales have occurred principally in Japan, South Korea, Taiwan and Europe.

      The Company's foreign revenues are generally denominated in United States
      dollars. Accordingly, foreign currency fluctuations have not had a
      significant impact on the comparison of the results of operations for the
      periods presented. The costs and expenses of the Company's international
      subsidiaries are generally denominated in currencies other than the United
      States dollar. However, since the functional currency of the Company's
      international subsidiaries is the local currency, foreign currency
      translation adjustments do not impact operating results, but instead are
      reflected as a component of stockholders' equity. To the extent the
      Company expands its international operations or changes its pricing
      practices to denominate prices in foreign currencies, the Company will be
      exposed to increased risk of currency fluctuation.



                                  Page 9 of 23

<PAGE>

      Many of the Company's customers purchase the Company's vacuum transfer
      robots and other modules before purchasing the Company's vacuum central
      wafer handling systems. The Company believes that once a customer has
      selected the Company's products for a process tool, the customer is likely
      to rely on those products for the life of that process tool model, which
      can be in excess of five years.

      The Company's business is highly dependent upon the capital expenditures
      of semiconductor and flat panel display manufacturers, which historically
      have been cyclical, and the Company's ability to develop, manufacture, and
      sell new products and product enhancements. The Company's results will
      also be affected, especially when measured on a quarterly basis, by the
      volume, composition and timing of orders, conditions in industries served
      by the Company, competition, and general economic conditions.

      The Company's stock is currently quoted on the Nasdaq National Market
      under the symbol "BRKS."








      RESULTS OF OPERATIONS

      The following table sets forth certain financial data for the periods
      indicated as a percentage of revenues:


<TABLE>
<CAPTION>
                                                            Nine months ended             Three months ended
                                                                 June 30,                      June 30,
                                                           1999           1998           1999           1998
                                                           ----           ----           ----           ----
<S>                                                       <C>            <C>            <C>            <C>
            Revenues:
               Product                                     84.5%          81.3%          77.8%          80.9%
               Services                                    15.5%          18.7%          22.2%          19.1%
                                                          ------         ------         ------         ------
                  Total revenues                          100.0%         100.0%         100.0%         100.0%
                                                          ------         ------         ------         ------

            Gross profit:
               Product                                     46.8%          27.3%          47.3%          24.7%
               Services                                    37.6%          34.2%          38.5%          44.9%
                  Total gross profit                       44.7%          28.6%          45.4%          28.5%

            Operating expenses:
               Research and development                    19.7%          22.6%          18.4%          19.6%
               Selling, general and administrative         27.5%          26.1%          27.5%          24.1%
                                                          ------         ------         ------         ------

            Loss from operations                           (2.5%)        (20.1%)         (0.5%)        (15.2%)
            Interest income, net                            3.0%           2.8%           2.3%           2.8%
                                                          ------         ------         ------         ------

            Income (loss) before income taxes               0.5%         (17.3%)          1.8%         (12.4%)
                                                          ======         ======         ======         ======
</TABLE>


                                 Page 10 of 23
<PAGE>

      NINE AND THREE MONTHS ENDED JUNE 30, 1999, COMPARED WITH NINE AND
      THREE MONTHS ENDED JUNE 30, 1998:

      Revenues

      For the nine months ended June 30, 1999, total revenues decreased 12.7% to
      $69.4 million compared to $79.6 million for the nine months ended June 30,
      1998. Product revenues decreased by 16.3% to $54.1 million and service
      revenues increased 2.9% to $15.3 million. For the three months ended June
      30, 1999, total revenues increased 2.1% to $26.4 million compared with
      revenues of $25.8 million in the comparable quarter of the prior fiscal
      year. Product revenues decreased 1.9% to $20.5 million and service
      revenues increased 18.8% to $5.9 million. The decrease in product revenues
      was primarily the result of the prolonged economic downturn currently
      impacting the semiconductor industry and related fabrication equipment
      sector. The increase in service revenues was primarily due to increased
      factory automation consulting and additional revenue due to the inclusion
      of Hanyon Technology, Inc. For the nine months ended June 30, 1999,
      international sales represented 41% of total revenues compared to 38% for
      the comparable nine months of the prior fiscal year. For the three months
      ended June 30, 1999, international sales represented 34% of total revenues
      compared to 49% for the comparable quarter last year. The Company expects
      that foreign revenues will continue to account for a significant portion
      of total revenues in fiscal 1999. There can be no assurance that foreign
      revenues, particularly from Asia, will remain a strong component of the
      Company's total revenues.

      Gross Profit

      Overall, the gross profit percentage increased to 44.7% for the nine
      months ended June 30, 1999, compared to 28.6% (33.9% excluding an
      inventory charge in the second quarter of fiscal 1998 of $4.2 million to
      provide additional reserves for slow-moving and obsolete inventories) in
      the comparable nine months of the prior fiscal year. The gross profit
      percentage for product revenue was 46.8% compared to 27.3% (33.8%
      excluding the inventory charge) in the comparable nine months of the prior
      fiscal year. For the three months ended June 30, 1999, the gross profit
      percentage increased to 45.4%, compared to 28.5% in the comparable quarter
      of the prior fiscal year. The gross profit percentage for product revenues
      was 47.3%, an increase from 24.7% in the comparable quarter of the prior
      fiscal year. The gross margin improvement is primarily due to lower
      material costs for hardware products and an increased percentage of sales
      of higher margin hardware products.

      For the nine months ended June 30, 1999, the gross profit percentage of
      service revenues increased to 37.6% from 34.2% in the comparable nine
      months of the prior fiscal year. For the three months ended June 30, 1999,
      the gross profit percentage of service revenues decreased to 38.5% as
      compared with 44.9% in the comparable quarter of the prior fiscal year. In
      future periods, gross profit may be adversely affected by changes in the
      mix of products sold, pricing pressures or increases in cost of revenues.

      Research and Development

      Research and development expenses decreased 24.1% to $13.7 million (19.7%
      of revenues) for the nine months ended June 30, 1999, from $18.0 million
      (22.6% of revenues) in the comparable nine months of the prior fiscal
      year. For the three months ended June 30, 1999, research and development
      expenses decreased 3.7% to $4.9 million (18.4% of revenues) from $5.1
      million (19.6% of revenues) in the comparable quarter of the prior fiscal
      year. The decrease in research and development expenses is due primarily
      to lower personnel and personnel-related costs following a reduction in
      headcount in the second and fourth quarters of fiscal 1998.

      However, the Company plans to continue to make investments in research and
      development to enhance existing and develop new semiconductor and flat
      panel display products and software products. The Company believes that
      research and development expenditures are essential to maintaining its
      competitive position in the semiconductor and flat panel display
      fabrication equipment and software markets and expects these expenditure
      levels to continue at or above current levels in the foreseeable future.

      Selling, General and Administrative

      Selling, general and administrative expenses decreased 7.7% to $19.1
      million (27.5% of revenues) for the nine months ended June 30, 1999, from
      $20.8 million (26.1% of revenues) in the comparable nine months of the
      prior fiscal year. The decrease in selling, general and administrative
      expenses is due primarily to lower personnel and personnel-related costs
      following a reduction in headcount in the second and fourth quarters of
      fiscal 1998 and expense control programs initiated during the third and
      fourth quarters of fiscal 1998. Selling, general and administrative
      expenses increased 15.6% to $7.2 million (27.5% of revenues) for the three
      months ended June 30, 1999, from $6.2 million (24.1% of revenues) in the
      comparable quarter of the prior fiscal year. The increase in selling,
      general and administrative expenses for the quarter is due primarily to
      the inclusion of Hanyon.



                                 Page 11 of 23
<PAGE>


      Interest Income, Net

      Interest income, net of interest and other expense, for the nine months
      ended June 30, 1999 decreased to $2.1 million from $2.2 million in the
      comparable nine months of the prior fiscal year. Interest income, net for
      the three months ended June 30, 1999, decreased to $614,000 from $728,000
      in the comparable quarter of the prior fiscal year. The decrease in
      interest income, net is due primarily to lower interest rates earned on
      invested funds in the current period. The comparable three months ended
      June 30, 1998 includes interest expense of $71,000 for deferred financing
      costs resulting from a repayment of the related note, as well as interest
      on subordinated notes and capital leases repaid during fiscal 1998.

      Income Tax Provision

      The Company recorded tax provisions of $536,000 and $232,000,
      respectively, for the nine and three-month periods ended June 30, 1999,
      due primarily to withholding taxes related to foreign operations. The
      Company recorded net tax benefits of $1,541,000 and $254,000,
      respectively, during the nine and three month periods of the prior fiscal
      year primarily reflecting the tax benefit of domestic net operating
      losses.

      LIQUIDITY AND CAPITAL RESOURCES

      As of June 30, 1999, the Company's principal source of liquidity consisted
      of $68.1 million in cash and cash equivalents, compared to $68.2 million
      at September 30, 1998. The Company had working capital of $97.8 million as
      of June 30, 1999, compared to $99.9 million at September 30, 1998.

      For the nine months ended June 30, 1999, cash and cash equivalents
      decreased $60,000 primarily as a result of $8.1 million of cash used for
      investing activities, offset by $7.6 million of cash provided by operating
      activities.

      The Company's investing activities consisted of $6.5 million for the
      purchase of businesses, net of cash acquired; capital spending aggregating
      $2.8 million, $3.5 million for the formation of a joint venture and the
      receipt of $1.5 million investment from the Company's partner in the joint
      venture during the nine months ended June 30, 1999. The capital
      expenditures were primarily for business information systems including
      computer hardware and software, as well as headquarters facility
      improvements. The Company expects to continue to make capital expenditures
      to support its business activities. Additionally, the Company is
      considering the acquisition of companies, technologies or products in 1999
      which are complementary to its business.


      Financing activities consisted of repayments of long-term debt and capital
      lease obligations more than offset by the proceeds from the issuance of
      common stock under the Company's employee stock plan.

      In the third quarter of fiscal 1999, the Company acquired Hanyon
      Technology, Inc. for $6.6 million in cash and Domain Manufacturing
      Corporation for $3.8 million in cash. In addition, the Company formed a
      joint venture with Samsung Electronics and made an investment of $3.5
      million. The other party to the joint venture invested $1.5 million.
      During the fourth quarter of 1999, the Company entered into an agreement
      and plan of merger with Smart Machines and signed a letter of intent to
      acquire the assets of the Infab division of Jenoptik AG..

      The Company is currently in discussion with potential lenders for a $25
      million line of credit to help fund future acquisitions. The Company
      believes that current cash and cash equivalent balances and the
      anticipated line of credit together will be adequate to fund planned
      working capital, capital expenditures, and investing requirements for at
      least the next twelve months. The Company can not guarantee that the
      anticipated line of credit will be obtained or will have terms that will
      be satisfactory to the Company.


                                 Page 12 of 23
<PAGE>

      YEAR 2000 READINESS

         The year 2000 issue is the potential for system and processing failure
      of date-related data as the result of computer-controlled systems using
      two digits rather than four digits to define the applicable year. For
      example, computer programs that have time-sensitive software may recognize
      a date using "00" as the year 1900 rather than the year 2000. This could
      result in system failure or miscalculations causing disruptions of
      operations, including, among other things, a temporary inability to
      process transactions, send invoices, or engage in similar normal business
      activities.

         Internal infrastructure compliance. The Company may be affected by year
      2000 issues related to noncompliant information technology systems and
      other systems operated or sold by the Company or by third parties. The
      Company has substantially completed assessment of its internal information
      technology systems and applications and believes that all critical
      applications are year 2000 compliant. The Company also has evaluated its
      information technology hardware and its non-information technology
      systems, including facilities and other operations, such as financial,
      security and utility systems. Though the Company believes these systems
      are substantially year 2000 compliant, the Company has scheduled
      remediation for non-compliant year 2000 items for completion by the end of
      the calendar year.

         Product compliance. The Company has completed a Year 2000 readiness
      evaluation of its current generation of released products and believes
      that products distributed after December 31, 1998 are Year 2000 compliant.
      The Company cannot guarantee that product testing has identified all Year
      2000 related issues that could have an adverse affect on the Company's
      financial condition and results of operations.

         Acquisitions. The Company has acquired three businesses since September
      1998, FASTech, Hanyon Technology, Inc., and Domain Manufacturing
      Corporation. The Company is in various stages of negotiation with respect
      to the acquisition of several additional businesses. The Company has
      entered into the definitive merger agreement with Smart Machines. As part
      of the Company's due diligence examination of completed acquisitions, the
      Company conducts a limited evaluation of the acquired business' year 2000
      readiness. The Company believes there are no significant year 2000 related
      issues arising from the companies that the Company has acquired. The
      Company cannot guarantee that it has identified and properly evaluated
      year 2000 issues relating to the acquired companies. The Company also can
      give no assurance that it will properly identify year 2000 issues relating
      to any companies acquired in the future.

         Third party Compliance. Although the Company believes that its systems
      are year 2000 compliant, the Company utilizes third-party equipment and
      software that may not be year 2000 compliant. In addition, the Company's
      products and software are often sold and integrated into or interfaced
      with third-party equipment or software. Failure of third-party equipment
      or software to operate properly with regard to the year 2000 and
      thereafter could require the Company to incur unanticipated expenses to
      remedy any problems, which could have a material adverse effect on the
      Company's business, results of operations and financial condition. The
      Company may also be vulnerable to any failures by its major suppliers,
      service providers and customers to remedy their own internal information
      technology and non-information technology systems' year 2000 issues which
      could, among other things, have a material adverse effect on the Company's
      supplies and orders. At this time, the Company is unable to estimate the
      nature or extent of any potential adverse impact resulting from the
      failure of third parties, such as its suppliers, service providers and
      customers, to achieve year 2000 compliance. Moreover, such third parties,
      even if year 2000 compliant, could experience difficulties resulting from
      year 2000 issues that may affect their suppliers, service providers and
      customers. As a result, although the Company does not currently
      anticipate, based upon surveys and discussions, that it will experience
      any material shipment delays from its major product suppliers or any
      material sales delays from its major customers due to year 2000 issues,
      there can be no assurance that these third parties will not experience
      year 2000 problems or that any problems would not have an adverse material
      effect on the Company's business, results of operations and financial
      condition. Because the cost and timing of year 2000 compliance by third
      parties such as suppliers, service providers and customers is not within
      the Company's control, the Company cannot give any assurance with respect
      to the cost or timing of


                                 Page 13 of 23
<PAGE>

      such efforts or any potential adverse effects on the Company of any
      failure by these third parties to achieve year 2000 compliance.

      The Company relies on commercial or government suppliers for services
      related to the Company's infrastructure, including utilities,
      transportation, financial, governmental, communications and other
      services. These suppliers pose an undetermined risk to the Company's
      facilities and operations worldwide. In some cases, alternate suppliers of
      these services, such as electrical utilities, are unavailable, and failure
      by a supplier could adversely impact the Company.

         Costs. Based on its investigation to date, the Company does not expect
      the total cost of its year 2000 assessment and planning to have a material
      adverse effect on the Company's business or financial results. On a
      cumulative basis, the Company has incurred approximately $500,000 in year
      2000 compliance costs. The Company expects to incur an additional $300,000
      in year 2000 compliance costs through the end of the calendar year. The
      Company is continuing its assessment and developing alternatives that may
      require additional expenses.

         Contingency Plan. The Company is currently developing a contingency
      plan in the event year 2000 problems relating to its operations arise. The
      Company's failure to develop a contingency plan could have a material
      adverse effect on the Company's business, results of operations and
      financial condition.

         Worst Case Scenario. To the extent that the Company does not identify
      any material non-compliant information technology systems or
      non-information technology systems operated by the Company or by third
      parties, such as the Company's suppliers, service providers and customers,
      the most reasonably likely worst case year 2000 scenario is a systemic
      failure beyond the control of the Company, such as a prolonged
      telecommunications or electrical failure, or a general disruption in
      United States or global business activities that could result in a
      significant economic downturn. The Company believes that the primary
      business risks, in the event of such failure or other disruption, would
      include but not be limited to, loss of customers or orders, increased
      operating costs, inability to obtain inventory on a timely basis,
      disruptions in product shipments, or other business interruptions of a
      material nature, as well as claims of mismanagement, misrepresentation, or
      breach of contract, any of which could have a material adverse effect on
      the Company's business, results of operations and financial condition.


                                 Page 14 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.

                ITEM 3. QUANTITATIVE AND QUALITATIVE DISCLOSURES
                                ABOUT MARKET RISK

      INTEREST RATE EXPOSURE

      Based on the Company's overall interest exposure at June 30, 1999,
      including all interest rate sensitive instruments, a near-term change in
      interest rates within a 95% confidence level based on historical interest
      rate movements would not materially affect the consolidated results of
      operations or financial position.

      CURRENCY RATE EXPOSURE

      The Company's foreign revenues are generally denominated in United States
      dollars. Accordingly, foreign currency fluctuations have not had a
      significant impact on the comparison of the results of operations for the
      periods presented. The costs and expenses of the Company's international
      subsidiaries are generally denominated in currencies other than the United
      States dollar. However, since the functional currency of the Company's
      international subsidiaries is the local currency, foreign currency
      translation adjustments do not impact operating results, but instead are
      reflected as a component of stockholders' equity. To the extent the
      Company expands its international operations or changes its pricing
      practices to denominate prices in foreign currencies, the Company will be
      exposed to increased risk of currency fluctuation.

      STOCK PRICE

      The stock prices of semiconductor equipment companies are subject to
      significant fluctuations. The Company's stock price may be affected by a
      variety of factors that could cause the price of the Company's Common
      Stock to fluctuate, perhaps substantially, including: announcements of
      developments related to the Company's business; quarterly fluctuations in
      the Company's actual or anticipated operating results and order levels;
      general conditions in the semiconductor and flat panel display industries
      or the worldwide economy; announcements of technological innovations; new
      products or product enhancements by the Company or its competitors;
      developments in patents or other intellectual property rights and
      litigation; and developments in the Company's relationships with its
      customers and suppliers. In addition, in recent years the stock market in
      general and the market for shares of small capitalization and
      semiconductor industry-related companies in particular, have experienced
      extreme price fluctuations which have often been unrelated to the
      operating performance of affected companies. Any such fluctuations in the
      future could adversely affect the market price of the Company's Common
      Stock. There can be no assurance that the market price of the Common Stock
      of the Company will not decline.


                                 Page 15 of 23
<PAGE>

                             BROOKS AUTOMATION, INC.

                                  RISK FACTORS

      FACTORS THAT MAY AFFECT FUTURE RESULTS

      From time to time, information provided by the Company or statements made
      by its employees may contain forward-looking information that involve
      substantial risks and uncertainties that could cause actual results to
      differ materially from targets or projected results.

      The Company's Dependence on the Cyclical Semiconductor Industry Materially
      Affects the Demand for The Company's Products. The Company's business is
      significantly dependent on capital expenditures by manufacturers of
      semiconductors. The semiconductor industry is highly cyclical and is
      presently experiencing a period of oversupply, resulting in significantly
      reduced demand for capital equipment, including the products manufactured
      and marketed by the Company. The Company's revenues in the past have been
      materially adversely affected by semiconductor industry downturns or
      slowdowns and may be materially adversely affected by future downturns.
      The Company believes (on the basis of its experience during the present
      downturn) that downturns in the semiconductor manufacturing industry will
      occur in the future, and will result in decreased demand for semiconductor
      manufacturing equipment.

      The Company's Reliance on a Small Number of Customers for a Large Portion
      of Its Revenues Could Have a Material Adverse Effect on the Company's
      Results of Operations. A significant portion of the Company's revenues in
      each fiscal period has been concentrated among a limited number of
      customers. If the Company lost one or more of these major customers, or if
      one or more major customers decreased its orders, the Company's business
      would be materially and adversely affected. Sales to the Company's ten
      largest customers accounted for 60% and 61% of total revenues in the first
      nine months of fiscal 1999 and 1998, respectively. Approximately 14% and
      17% of the Company's total revenues in the first nine months of 1999 and
      1998, respectively were derived from sales to Lam Research Corporation,
      the Company's largest customer and a related party. The Company expects
      that sales to Lam will continue to represent a significant portion of the
      Company's revenues for the foreseeable future. The Company's future
      operating results depend on the success of these customers and the
      Company's success in selling products to them.

      Delays in Shipment of a Few Systems Could Substantially Decrease Revenues
      For a Period. The Company has historically derived a substantial portion
      of its quarterly and annual revenues from the sale of a relatively small
      number of semiconductor and flat panel display handling systems. These
      systems have relatively high selling prices compared to its other
      products. As a result, the precise timing of the recognition of revenue
      from an order for one or a small number of systems can have a significant
      impact on the Company's total revenues and operating results for a
      particular period. The Company's operating results for a particular period
      could be adversely affected if orders for a small number of systems are
      canceled or rescheduled by customers or cannot be filled in time to
      recognize revenue during that period due to unanticipated delays in
      manufacturing, testing, shipping or product acceptance.

      The Company Has Significant Fixed Costs Which Are Not Easily Reduced if
      Revenues Fall Below Expectations. The Company's expense levels are based,
      in part, on its expectations as to future revenues. Many of the Company's
      expenses, particularly those relating to capital equipment and
      manufacturing overhead, are relatively fixed. The Company's ability to
      reduce expenses is also constrained by the need for continual investment
      in research and development and the need to maintain extensive ongoing
      customer service and support capability for its existing customer base.
      These investments create significant fixed costs that the Company may be
      unable to reduce rapidly, if at all, in the event of a semiconductor
      industry downturn or other reduction in revenue. Accordingly, any downturn
      in revenue could have a material adverse effect on the Company's business,
      financial condition and results of operations.

      The Company's Sales Volume is Affected by Its Original Equipment
      Manufacturing Customers' Sales Volume. The Company's products are
      principally sold to original equipment manufacturers which incorporate the
      Company's products into their equipment. Due to the significant capital
      commitments usually incurred by semiconductor and flat panel display
      manufacturers in their purchases of equipment from these original
      equipment manufacturers, they demand highly reliable products which may
      require several years for the original equipment manufacturers to develop.
      The Company's revenues are therefore primarily dependent upon the timing
      and effectiveness of the efforts of its customers in developing and
      marketing equipment which incorporates the Company's products.

      The Company's Lengthy Sales Cycle Requires the Company to Incur
      Significant Expenses With No Assurance That The Company will Generate
      Revenue. The Company's new products are generally incorporated into an
      original equipment manufacturers' customer's process tools at the design
      stage. However, customer decisions to use the Company's products can often
      require significant expenditures by


                                 Page 16 of 23
<PAGE>

      the Company without any assurance of success. These customer decisions
      often precede the generation of volume sales, if any, by a year or more.
      The Company cannot guarantee that it will continue to achieve design wins
      or that the process tools manufactured by the Company's customers will be
      commercially successful. The company's or its customers' failure to
      develop and introduce new products successfully and in a timely manner
      could materially adversely affect the Company's business and results of
      operations.

      The Company's Operating Results Fluctuate Significantly. The Company's
      operating results have in the past fluctuated and may in the future
      continue to fluctuate significantly depending upon a variety of factors.
      Some of these factors may include:

      .   the level of demand for semiconductors in general;

      .   cyclicality in the market for semiconductor manufacturing equipment;

      .   the timing and size of orders from the Company's customer base;

      .   the ability of the Company to manufacture, test and deliver products
          in a timely and cost effective manner;

      .   the Company's success in winning competitions with competitors for
          orders;

      .   the timing of new product announcements and releases by the Company
          and its competitors;

      .   the mix of products sold by the Company; and

      .   competitive pricing pressures.

      The Company Conducts Its Business Internationally, Which Exposes It to a
      Number of Difficulties in Coordinating Its Activities Outside the United
      States and Dealing with Multiple Regulatory Environments. Approximately
      41% and 38% of the Company's total revenues in the first nine months of
      fiscal 1999 and 1998, respectively, were derived from customers located
      outside the United States. The Company anticipates that international
      sales will continue to account for a significant portion of its revenues.
      The Company's international business may be materially adversely affected
      by:

      .   difficulties in staffing and managing operations in multiple locations
          in many countries;

      .   greater difficulties in trade accounts receivable collection;

      .   possibly adverse tax consequences;

      .   governmental currency controls;

      .   changes in various regulatory requirements;

      .   political and economic changes and disruptions;

      .   currency exchange rate changes;

      .   export/import controls; and

      .   tariff regulations.

      To support its international customers, the Company maintains subsidiaries
      in several countries, including Japan, South Korea, Germany, United
      Kingdom, Taiwan and Singapore. The Company cannot



                                 Page 17 of 23

<PAGE>

      guarantee that it will be able to manage these operations effectively or
      that the Company's investment in these activities will enable it to
      compete successfully in international markets or to meet the service and
      support needs of its customers. For the foreseeable future the Company
      will continue to be affected by unstable Asian economies, particularly
      those in Japan and South Korea. It is not possible to determine the future
      effect a continuation of the Asian economic crisis may have on the
      Company's financial position and results of operations.

      Although the Company's international sales are primarily denominated in US
      dollars, changes in currency exchange rates can make it more difficult for
      the Company to compete with foreign manufacturers on price. If the
      Company's international sales increase relative to the Company's total
      revenues, these factors could have a more pronounced effect on the
      Company's operating results.

      The Company Must Continually Improve Its Technology to Remain Competitive.
      Technology changes rapidly in the semiconductor and flat panel display
      manufacturing industries. The Company believes that this will continue to
      be true. The Company's success will depend upon its ability to enhance its
      existing products and to develop and market new products to meet customer
      requirements. Successful product development and introduction depends on a
      number of factors, including accurate new product definition, timely
      completion and introduction of new product designs, and market acceptance
      of the Company's products and its customers' products. In order to address
      emerging industry requirements for larger diameter 300mm wafer and fourth
      generation flat panel substrates, the Company's current major development
      programs include expanding its product offerings of data storage and for
      semiconductor and flat panel display substrate handling systems as well as
      wafer handling systems and modules for atmospheric process tools. In
      addition, the Company continues to develop and enhance its factory
      automation software product offerings, including its manufacturing
      execution systems and equipment automation solutions for factorywide
      integration. The Company cannot guarantee that it will adjust to changing
      market conditions or be commercially successful in introducing products or
      product enhancements.

      The Company Faces Significant Competition which Could Result in Decreased
      Demand for the Company's Products or Services. The markets for the
      Company's products are intensely competitive and the Company may not be
      able to compete successfully. The Company believes that its primary
      competition is from integrated original equipment manufacturers that
      satisfy their semiconductor and flat panel display handling needs in-house
      rather than by purchasing systems or modules from an independent supplier
      such as the Company. Many of these original equipment manufacturers have
      substantially greater resources than the Company. Applied Materials, Inc.,
      the leading process equipment original equipment manufacturer, develops
      and manufactures its own central wafer and flat panel display substrate
      handling systems and modules. The Company may not be successful in selling
      its products to original equipment manufacturers that currently satisfy
      their substrate handling needs in-house, regardless of the performance or
      the price of the Company's products. Moreover, integrated original
      equipment manufacturers may begin to commercialize their handling
      capabilities and become competitors of the Company.

      The Company's Business Could be Materially Adversely Affected if the
      Company Fails to Adequately Integrate Acquired Businesses. The Company
      has completed a number of acquisitions in a short period of time,
      subjecting it to significant risks, including:

      .   difficulties in the assimilation of operations, products and corporate
          cultures;

      .   difficulties in completing the development of acquired technologies;

      .   difficulties in managing geographically remote units;

      .   the risks of entering markets or types of businesses in which it has
          limited or no direct experience; and

      .   the potential loss of key employees of the acquired companies.


                                 Page 18 of 23

<PAGE>
      Any delay or failure to integrate an acquired company, technology or
      product line could result in the additional expenditure of money, charges
      to income and increased demands on the time of the Company's management.
      As a result of these and other risks, the Company may not realize
      anticipated benefits from recent acquisitions. The Company's failure to
      achieve these benefits could have a material adverse effect on the
      Company's business, results of operations or financial condition.

      Future Acquisitions May Involve Expending Significant funds, Incurring
      Additional Debt or the Issuance of Additional Securities, Which May
      Materially Affect the Company's Results of Operations and be Dilutive to
      Shareholders. The negotiation of potential acquisitions and the
      integration of an acquired business diverts the time and resources of the
      Company's management from the day-to-day operation of the Company's
      business. Acquisitions may involve expending significant funds, incurring
      additional debt or the issuance of additional securities, which may
      materially adversely affect the Company's results of operations and be
      dilutive to the Company's shareholders. If the Company expends significant
      funds or incurs additional debt, its ability to obtain financing for
      working capital or other purposes could decline and the Company may be
      more vulnerable to economic downturns and competitive pressures.

      The Company May Have Difficulty Protecting Its Intellectual  Property. The
      Company's ability to compete is heavily affected by its ability to protect
      its intellectual property. The Company relies primarily on trade secret
      laws, confidentiality procedures, patents, copyrights, trademarks and
      licensing arrangements to protect its intellectual property. The steps the
      Company has taken to protect its technology may be inadequate. Existing
      trade secret, trademark and copyright laws offer only limited protection.
      Company patents could be invalidated or circumvented. The laws of certain
      foreign countries in which the Company's products are or may be developed,
      manufactured or sold may not protect the Company's products or
      intellectual property rights to the same extent, as do the laws of the
      United States. This may make the possibility of piracy of the Company's
      technology and products more likely. The Company cannot assure you that
      the steps taken by the Company to protect its intellectual property will
      be adequate to prevent misappropriation of the Company's technology.

      The Company's Operations Could Infringe the Intellectual Property Rights
      of Others. Particular aspects of the Company's technology could be found
      to infringe on the intellectual property rights or patents of others.
      Other companies may hold or obtain patents on inventions or may otherwise
      claim proprietary rights to technology necessary to the Company's
      business. The Company cannot predict the extent to which it may be
      required to seek licenses. The Company cannot guarantee that the terms of
      any licenses the Company may be required to seek will be reasonable.

      The Company's Business May Be Materially and Adversely Affected By Certain
      Infringement Claims. The Company has received notice from General Signal
      Corporation alleging infringements of its patent rights by certain of the
      Company's products. The notification advised the Company that General
      Signal was attempting to enforce its rights to those patents in litigation
      against Applied Materials, and that, at the conclusion of that litigation,
      General Signal intended to enforce its rights against the Company and
      others. According to a press release issued by Applied Materials in
      November 1997, Applied Materials settled its litigation with General
      Signal by acquiring ownership of five General Signal patents. Although not
      verified by the Company, these five patents would appear to be the patents
      referred to by General Signal in its prior notice to the Company. Applied
      Materials has not contacted the Company regarding these patents.

      The Company Needs Employees Who Are Difficult to Hire And Retain. The
      Company needs to hire additional management level employees and
      substantial numbers of employees with technical backgrounds for both the
      Company's hardware and software engineering and support staffs. The market
      for these employees is becoming increasingly competitive, and the Company
      has occasionally experience delays in hiring these personnel. The
      Company's inability to recruit, retain and train adequate numbers of
      qualified personnel on a timely basis would adversely effect the Company's
      ability to develop, manufacture, install and support systems.

      The Company is Not Protected By Long-Term Contracts with Its Customers.
      The Company generally does not enter into long-term contracts with its
      customers and cannot be certain as to future order levels



                                 Page 19 of 23

<PAGE>


      from them. The Company's customers, including Lam Research Corporation,
      could reduce, delay or cease orders for products and services at any time,
      which could materially adversely affect the Company's business and results
      of operations.

      Provisions of the Company's Certificate of Incorporation, Bylaws and
      Contracts Make a Takeover of the Company More Difficult, Which Could
      Discourage Attractive Takeover Offers and Limit the Price Investors May be
      Willing to Pay for the Company's Common Stock. The Company's Certificate
      of Incorporation and Bylaws contain provisions that may make an
      acquisition of the Company more difficult and discourage changes in the
      Company's management. These provisions could limit the price that certain
      investors might be willing to pay in the future for shares of the
      Company's common stock. In addition, the Company has adopted a rights plan
      (popularly known as a "poison pill"). In many potential takeover
      situations, rights issued under the plan become exercisable to purchase
      the Company's common stock at a price substantially discounted from the
      then applicable market price of the Company's common stock. Because of its
      possible dilutive effect to a potential acquirer, the rights plan could
      generally discourage third parties from proposing a merger with or tender
      offer for the Company that is not approved by the Company's board of
      directors. Accordingly, the rights plan could have an adverse impact on
      shareholders who might want to vote in favor of the merger or participate
      in the tender offer. In addition, shares of the Company's preferred stock
      may be issued upon terms the board of directors deems appropriate without
      shareholder approval. The Company's ability to issue preferred stock in
      such a manner could enable its board of directors to prevent changes in
      the Company's management or control.

      The Volatility of the Company's Stock Price Could Adversely Affect Your
      Investment in the Company's Stock. The market price of the Company's
      common stock has fluctuated widely. For example, between April 26, 1999
      and April 28, 1999, the price of the Company's common stock dropped from
      approximately $27.88 to $19.63 per share. Between January 25, 1999 and
      January 29, 1999, the price of the Company's common stock rose from
      approximately $17.06 to $24.06 per share. Consequently, the current market
      price of the Company's common stock may not be indicative of future market
      prices, and the Company may not be able to sustain or increase the value
      of your investment in the Company's common stock. Factors affecting the
      Company's stock price may include:

      .   variations in operating results from quarter to quarter;

      .   changes in earnings estimates by analysts or the Company's failure to
          meet analysts' expectations;

      .   market conditions in the industry;

      .   general economic conditions; and

      .   low volume of trading of the Company's common stock.

      In addition, the stock market has recently experienced extreme price and
      volume fluctuations. These fluctuations have particularly affected the
      market prices of the securities of many high technology companies like the
      Company. These market fluctuations could adversely affect the market price
      of the Company's common stock.

      Year 2000 Readiness; Year 2000 Problems Could Disrupt The Company's
      Business. The year 2000 problem is the potential for system and processing
      failure of date-related data as the result of computer-controlled systems
      using two digits rather than four digits to define the applicable year.
      For example, computer programs that have time-sensitive software may
      recognize a date using "00" as the year 1900 rather than the year 2000.
      This could result in system failure or miscalculations causing disruptions
      of operations, including, among other things, temporary inability to
      process transactions, send invoices, or engage in similar normal business
      activities.

      The Company has evaluated its internal software and products for year 2000
      problems. The Company believes that its products and business will not be
      substantially affected by the year 2000 problem and that


                                 Page 20 of 23
<PAGE>

      the Company has no significant exposure to liabilities related to the year
      2000 problem for the products the Company has sold. The Company has also
      communicated with others, including vendors, suppliers and customers whose
      computer systems' functionality could directly impact the Company's
      operations.

      Although the Company believes its planning efforts are adequate to address
its year 2000 concerns, undetected year 2000 problems may cause the Company to
experience negative consequences or significant costs. The Company cannot be
sure that its vendors, suppliers, customers or businesses that it may acquire
will not experience similar consequences or costs. Such consequences or costs
could have a material adverse effect on the Company.



                                 Page 21 of 23

<PAGE>


                             BROOKS AUTOMATION, INC.

                           PART II. OTHER INFORMATION





Item 6 (a)  EXHIBITS.
            --------

            Exhibit No.
            -----------

            2.04  Stock for Cash Purchase Agreement dated as of June 30,
                  1999 between the registrant and Domain Manufacturing.
                  Incorporated by reference to the Company's Current Report
                  on Form 8-K dated July 14, 1999.

            27.01 Financial Data Schedule

            The following financial data schedules have been restated to reflect
            a pooling of interests with FASTech Integration, Inc.

            27.02 Restated Financial Data Schedule
            27.03 Restated Financial Data Schedule
            27.04 Restated Financial Data Schedule
            27.05 Restated Financial Data Schedule
            27.06 Restated Financial Data Schedule
            27.07 Restated Financial Data Schedule
            27.08 Restated Financial Data Schedule
            27.09 Restated Financial Data Schedule
            27.10 Restated Financial Data Schedule

Item 6 (b)  REPORTS ON FORM 8-K
            ------------------

            The Company filed a Current Report on Form 8-K dated May 6, 1999
            reporting the acquisition of Hanyon Technology, Inc. Subsequently,
            on July 6, 1999 the Company filed an amended report on Form 8-K
            including the financial statements of Hanyon.


                                 Page 22 of 23









<PAGE>

                                   SIGNATURES



Pursuant to the requirements of the Securities Exchange Act of 1934, the
Registrant has duly caused this report to be signed on its behalf by the
undersigned thereunto duly authorized.




                             BROOKS AUTOMATION, INC.





  August 16, 1999                        /s/ Robert J. Therrien
- -------------------                      -------------------------------
                                         Robert J. Therrien
                                         Director and President
                                         (Principal Executive Officer)


  August 16, 1999                        /s/ Ellen B. Richstone
- -------------------                      -------------------------------
                                         Ellen B. Richstone
                                         Senior Vice President and
                                         Chief Financial Officer
                                         (Principal Financial Officer)




                                 Page 23 of 23











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                           10,745
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                           10,366
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                           10,610
                                        152
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<S>                             <C>
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                           10,470
                                        152
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<S>                             <C>
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                           10,331
                                        152
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THIS SCHEDULE CONTAINS SUMMARY FINANCIAL INFORMATION EXTRACTED FROM 9/30/96 FORM
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<S>                             <C>
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                                        152
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<S>                             <C>
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                                0
                                          0
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